RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 ATP8A1Q9Y2Q0 1164 aa11.19□□□□□ -0.62
NDUFA9-202ENST00000396655 PCDHGA1Q9Y5H4 931 aa11.19□□□□□ -0.62
NDUFA9-202ENST00000396655 A0A0A6YYK5 440 aaPredicted RBP11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 POM121BA6NF01 834 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 NEMP2A6NFY4 417 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 TMEM110-MUSTN1A8MSY1 372 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 MATN3O15232 486 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 CD48P09326 243 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 FTH1P19P0C7X4 201 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 CYLC1P35663 651 aaPredicted RBP11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 MMP12P39900 470 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 GARSP41250 739 aaKnown RBP11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 MAGEA1P43355 309 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 MMP13P45452 471 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 RGRP47804 291 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 PEX5P50542 639 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 SCNN1BP51168 640 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 TAS2R40P59535 323 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 PFN3P60673 137 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 HNRNPKP61978 463 aaKnown RBP eCLIP11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 PTK2BQ14289 1009 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 MESDQ14696 234 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 PRAMEF14Q5SWL7 426 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 ALG1LQ6GMV1 187 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 TMTC1Q8IUR5 882 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 TP53INP2Q8IXH6 220 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 MAML1Q92585 1016 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 TBATAQ96M53 351 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 RNF157Q96PX1 679 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 SCNM1Q9BWG6 230 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 BRD8Q9H0E9 1235 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 RBSNQ9H1K0 784 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 PCDH12Q9NPG4 1184 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 DDX56Q9NY93 547 aaKnown RBP11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 FTSJ1Q9UET6 329 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 MSRB2Q9Y3D2 182 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 CSNK1G3Q9Y6M4 447 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 FREM2Q5SZK8 3169 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 AKAP13Q12802 2813 aa11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 SMG1Q96Q15 3661 aaKnown RBP11.18□□□□□ -0.62
NDUFA9-202ENST00000396655 MUSKO15146 869 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 RAD51BO15315 384 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 MMP20O60882 483 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 PIGNO95427 931 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 CSF2P04141 144 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 ZFXP17010 805 aaPredicted RBP11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 DGKAP23743 735 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 CLDN2P57739 230 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 FOXC1Q12948 553 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 BNIP3Q12983 259 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 MMRN1Q13201 1228 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 ZNF211Q13398 564 aaPredicted RBP11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 ILKQ13418 452 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 LRRC14Q15048 493 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 SPA17Q15506 151 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 NCBP2-AS2Q69YL0 99 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 SLCO6A1Q86UG4 719 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 PARGQ86W56 976 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 RHOT1Q8IXI2 618 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 RAVER1Q8IY67 606 aaKnown RBP11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 SLC22A18ASQ8N1D0 253 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 SLC25A45Q8N413 288 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 PQLC3Q8N755 202 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 BTN2A2Q8WVV5 523 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 POLR1EQ9GZS1 481 aaKnown RBP11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 FZD3Q9NPG1 666 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 TOR4AQ9NXH8 423 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 GGT7Q9UJ14 662 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 PHTF1Q9UMS5 762 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 ITM2BQ9Y287 266 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 CA5BQ9Y2D0 317 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 PPIL1Q9Y3C6 166 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 ANKRD36A6QL64 1941 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 DMXL2Q8TDJ6 3036 aa11.17□□□□□ -0.62
NDUFA9-202ENST00000396655 SHROOM3Q8TF72 1996 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 TMEM8BA6NDV4 472 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 C3orf70A6NLC5 250 aaPredicted RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 SCAMP1O15126 338 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 PIAS2O75928 621 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 IPO7O95373 1038 aaKnown RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 LDOC1O95751 146 aaPredicted RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 HOXC4P09017 264 aaPredicted RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 ATXN1LP0C7T5 689 aaKnown RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 KRT10P13645 584 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 NME1P15531 152 aaKnown RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 NR2C2P49116 596 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 LIG3P49916 1009 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 FZD2Q14332 565 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 TAZQ16635 292 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 HS1BP3Q53T59 392 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 SLC9A4Q6AI14 798 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 DPPA4Q7L190 304 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 BZW1Q7L1Q6 419 aaKnown RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 PTAR1Q7Z6K3 402 aaPredicted RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 GATAD2AQ86YP4 633 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 NDUFAF2Q8N183 169 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 CACTIN-AS1Q8N1I8 211 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 CBARPQ8N350 705 aaPredicted RBP11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 GALNT15Q8N3T1 639 aa11.16□□□□□ -0.62
NDUFA9-202ENST00000396655 SDR16C5Q8N3Y7 309 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms