RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 MCCC1Q96RQ3 725 aaPredicted RBP16.53■□□□□ 0.24
AP1S3-202ENST00000396653 GPR174Q9BXC1 333 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 ADGRE3Q9BY15 652 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 DUSP15Q9H1R2 295 aaPredicted RBP16.53■□□□□ 0.24
AP1S3-202ENST00000396653 EPC1Q9H2F5 836 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 PCYOX1Q9UHG3 505 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 CHKBQ9Y259 395 aa16.53■□□□□ 0.24
AP1S3-202ENST00000396653 LOC285095A0A1B0GVY8 99 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 ERI2A8K979 691 aaKnown RBP16.52■□□□□ 0.24
AP1S3-202ENST00000396653 RIOK3O14730 519 aaKnown RBP16.52■□□□□ 0.24
AP1S3-202ENST00000396653 SPINT1O43278 529 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 MAP3K13O43283 966 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 PMPCBO75439 489 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 RHOBTB1O94844 696 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 METTL18O95568 372 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 NDST3O95803 873 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 GAS8O95995 478 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 PDHA1P08559 390 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 MMP12P39900 470 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 CCR5P51681 352 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 WNT3AP56704 352 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 SRSF5Q13243 272 aaKnown RBP16.52■□□□□ 0.24
AP1S3-202ENST00000396653 SIM2Q14190 667 aaPredicted RBP16.52■□□□□ 0.24
AP1S3-202ENST00000396653 ELF2Q15723 593 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 PLK5Q496M5 336 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 TMEM52BQ4KMG9 183 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 KIAA1161Q6NSJ0 714 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 USP45Q70EL2 814 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 CEP68Q76N32 757 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 DPPA4Q7L190 304 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 LPCAT2Q7L5N7 544 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 GLIS1Q8NBF1 620 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 FOXJ1Q92949 421 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 IFT43Q96FT9 208 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 MRGPRX2Q96LB1 330 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 LYSMD1Q96S90 227 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 MLPHQ9BV36 600 aaPredicted RBP16.52■□□□□ 0.24
AP1S3-202ENST00000396653 FSD1LQ9BXM9 530 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 DDX47Q9H0S4 455 aaKnown RBP16.52■□□□□ 0.24
AP1S3-202ENST00000396653 SEMA4AQ9H3S1 761 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 PCDH12Q9NPG4 1184 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 INVSQ9Y283 1065 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 MRFAP1Q9Y605 127 aa16.52■□□□□ 0.24
AP1S3-202ENST00000396653 PLXNA2O75051 1894 aa16.52■□□□□ 0.23
AP1S3-202ENST00000396653 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.51■□□□□ 0.23
AP1S3-202ENST00000396653 A0A0J9YYE9 177 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 CAPN8A6NHC0 703 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 ECEL1O95672 775 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 TRBC1P01850 177 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 CYP2A6P11509 494 aaPredicted RBP16.51■□□□□ 0.23
AP1S3-202ENST00000396653 ETS1P14921 441 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 HLA-DPA1P20036 260 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 RPL22P35268 128 aaKnown RBP16.51■□□□□ 0.23
AP1S3-202ENST00000396653 NUDT1P36639 197 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 NBL1P41271 181 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 TNNT3P45378 269 aaPredicted RBP16.51■□□□□ 0.23
AP1S3-202ENST00000396653 EPHB1P54762 984 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 SEMA5AQ13591 1074 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 PCSK7Q16549 785 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 KIAA0895LQ68EN5 471 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 KCTD11Q693B1 232 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 SYDE1Q6ZW31 735 aaPredicted RBP16.51■□□□□ 0.23
AP1S3-202ENST00000396653 SPATA4Q8NEY3 305 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 LPCAT1Q8NF37 534 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 IPMKQ8NFU5 416 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 CCHCR1Q8TD31 782 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 SCRN2Q96FV2 425 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 SRPK1Q96SB4 655 aaKnown RBP16.51■□□□□ 0.23
AP1S3-202ENST00000396653 LRRC40Q9H9A6 602 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 UBP1Q9NZI7 540 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 NEU2Q9Y3R4 380 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 R4GN57 208 aa16.51■□□□□ 0.23
AP1S3-202ENST00000396653 SCN8AQ9UQD0 1980 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3DA0A087WVF3 549 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3IA0A087WXS9 549 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3EA0A087X179 549 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3KA0A087X1G2 549 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3FA6NER0 549 aaPredicted RBP16.5■□□□□ 0.23
AP1S3-202ENST00000396653 METTL12A8MUP2 240 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 ESPNB1AK53 854 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 ANKRD66B4E2M5 251 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3LB9A6J9 549 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 F5H423 210 aaPredicted RBP16.5■□□□□ 0.23
AP1S3-202ENST00000396653 LATO43561 262 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 AP2A1O95782 977 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 KRT14P02533 472 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 FGF1P05230 155 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3HP0C7X1 549 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 VIPR1P32241 457 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 ADRA1AP35348 466 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 RALGDSQ12967 914 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 DHX34Q14147 1143 aaKnown RBP16.5■□□□□ 0.23
AP1S3-202ENST00000396653 QPCTQ16769 361 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3GQ6DHY5 549 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3CQ6IPX1 549 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 CCDC70Q6NSX1 233 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 HORMAD1Q86X24 394 aa16.5■□□□□ 0.23
AP1S3-202ENST00000396653 TBC1D3Q8IZP1 549 aaPredicted RBP16.5■□□□□ 0.23
AP1S3-202ENST00000396653 ATOH1Q92858 354 aaPredicted RBP16.5■□□□□ 0.23
AP1S3-202ENST00000396653 LOXL4Q96JB6 756 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms