RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 DHRS12A0PJE2 317 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 TRPC5OSA6NMA1 111 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 H3BMM5 538 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 NME4O00746 187 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 SIX3O95343 332 aaPredicted RBP14.4□□□□□ -0.1
CLIP2-203ENST00000395060 C8BP07358 591 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 TNFAIP2Q03169 654 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 RELAQ04206 551 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 NR1D2Q14995 579 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 RABL3Q5HYI8 236 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 DCBLD1Q8N8Z6 715 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 OR52K2Q8NGK3 314 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 OR2T34Q8NGX1 318 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 OR2T3Q8NH03 318 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 VPS33AQ96AX1 596 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 NPLQ9BXD5 320 aaPredicted RBP14.4□□□□□ -0.1
CLIP2-203ENST00000395060 ANKRD60Q9BZ19 345 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 CASS4Q9NQ75 786 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 SSC5DA1L4H1 1573 aa14.4□□□□□ -0.1
CLIP2-203ENST00000395060 YJEFN3A6XGL0 299 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 COQ9O75208 318 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 H2AFYO75367 372 aaKnown RBP14.39□□□□□ -0.11
CLIP2-203ENST00000395060 C22orf31O95567 290 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 USP17L7P0C7H9 530 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 HMOX2P30519 316 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 BMXP51813 675 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 ECT2LQ008S8 904 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 ZBED5Q49AG3 693 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 EGFLAMQ63HQ2 1017 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 BTLAQ7Z6A9 289 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 PIM3Q86V86 326 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 SLC15A4Q8N697 577 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 RHOBTB2Q9BYZ6 727 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 WARS2Q9UGM6 360 aaKnown RBP14.39□□□□□ -0.11
CLIP2-203ENST00000395060 VPS28Q9UK41 221 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 FADS3Q9Y5Q0 445 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 FUOMA2VDF0 154 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 DLGAP1O14490 977 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 TRIM24O15164 1050 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 TSPAN1O60635 241 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 HUS1O60921 280 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 YBX3P16989 372 aaKnown RBP eCLIP14.39□□□□□ -0.11
CLIP2-203ENST00000395060 CARTPTQ16568 116 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 HDAC11Q96DB2 347 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 COX4I2Q96KJ9 171 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 OLFM1Q99784 485 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 NUDT5Q9UKK9 219 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 CRYL1Q9Y2S2 319 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 OR51F1A6NGY5 319 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 UBFD1O14562 309 aaKnown RBP14.39□□□□□ -0.11
CLIP2-203ENST00000395060 BAIAP3O94812 1187 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 POLR2IP36954 125 aaKnown RBP14.39□□□□□ -0.11
CLIP2-203ENST00000395060 TKTL1P51854 596 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 STX1BP61266 288 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 RPS6KA2Q15349 733 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 SAMD4BQ5PRF9 694 aaKnown RBP14.39□□□□□ -0.11
CLIP2-203ENST00000395060 NCCRP1Q6ZVX7 275 aaPredicted RBP14.39□□□□□ -0.11
CLIP2-203ENST00000395060 GPC2Q8N158 579 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 TBC1D15Q8TC07 691 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 NUDT8Q8WV74 236 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 MAML3Q96JK9 1138 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 TMEM74Q96NL1 305 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 GPR78Q96P69 363 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 GPATCH1Q9BRR8 931 aaKnown RBP14.39□□□□□ -0.11
CLIP2-203ENST00000395060 DGCR6LQ9BY27 220 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 ULBP1Q9BZM6 244 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 ST14Q9Y5Y6 855 aa14.39□□□□□ -0.11
CLIP2-203ENST00000395060 PHIPQ8WWQ0 1821 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 A0A0J9YYE9 177 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 A8MT66 165 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 KPNA6O60684 536 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 APOA4P06727 396 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 ALDOCP09972 364 aaKnown RBP14.38□□□□□ -0.11
CLIP2-203ENST00000395060 HSPA8P11142 646 aaKnown RBP14.38□□□□□ -0.11
CLIP2-203ENST00000395060 MATN1P21941 496 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 KCNC1P48547 511 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 EIF2B2P49770 351 aaKnown RBP14.38□□□□□ -0.11
CLIP2-203ENST00000395060 TNK2Q07912 1038 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 CDH17Q12864 832 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 SFSWAPQ12872 951 aaKnown RBP14.38□□□□□ -0.11
CLIP2-203ENST00000395060 TMEM214Q6NUQ4 689 aaKnown RBP14.38□□□□□ -0.11
CLIP2-203ENST00000395060 RIOX2Q8IUF8 465 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 TMEM126BQ8IUX1 230 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 ANKRD49Q8WVL7 239 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 HDAC10Q969S8 669 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 BRD8Q9H0E9 1235 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 HIPK3Q9H422 1215 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 FANCEQ9HB96 536 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.38□□□□□ -0.11
CLIP2-203ENST00000395060 TSR3Q9UJK0 312 aaKnown RBP14.38□□□□□ -0.11
CLIP2-203ENST00000395060 TCRBV3S1A0A5B6 114 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 SLCO1B7G3V0H7 640 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 DCLK1O15075 740 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 ADAM23O75077 832 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 ADRA1BP35368 520 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 CD97P48960 835 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 SNX16P57768 344 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 GRB7Q14451 532 aa14.38□□□□□ -0.11
CLIP2-203ENST00000395060 PIWIL3Q7Z3Z3 882 aaKnown RBP14.38□□□□□ -0.11
CLIP2-203ENST00000395060 FUNDC1Q8IVP5 155 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms