RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 PKP2Q99959 881 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 RHOJQ9H4E5 214 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 TREX1Q9NSU2 369 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 MIA3Q5JRA6 1907 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 H3BNX3 289 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 MPSTP25325 297 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 PRDX6P30041 224 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 RELAQ04206 551 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 DSC3Q14574 896 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 PKN3Q6P5Z2 889 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 NUP93Q8N1F7 819 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 STYXQ8WUJ0 223 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 CASP10Q92851 521 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 CIB1Q99828 191 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 HEPHQ9BQS7 1158 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 ACE2Q9BYF1 805 aaPredicted RBP15.65■□□□□ 0.1
PTBP1-204ENST00000394601 SLC39A8Q9C0K1 460 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 AP5M1Q9H0R1 490 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 SLC2A6Q9UGQ3 507 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 CDY1Q9Y6F8 540 aa15.65■□□□□ 0.1
PTBP1-204ENST00000394601 HTR3EA5X5Y0 456 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 RCVRNP35243 200 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 KLF10Q13118 480 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 BTG3Q14201 252 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-204ENST00000394601 ZNF460Q14592 562 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 NEDD8Q15843 81 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 PAN2Q504Q3 1202 aaKnown RBP15.64■□□□□ 0.09
PTBP1-204ENST00000394601 PRR23BQ6ZRT6 265 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 SNX32Q86XE0 403 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 SLC15A3Q8IY34 581 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 TDRD5Q8NAT2 981 aaKnown RBP15.64■□□□□ 0.09
PTBP1-204ENST00000394601 FAM96AQ9H5X1 160 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 NOL6Q9H6R4 1146 aaKnown RBP15.64■□□□□ 0.09
PTBP1-204ENST00000394601 OSER1Q9NX31 292 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 CIDEBQ9UHD4 219 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 ZDHHC2Q9UIJ5 367 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 SLC39A10Q9ULF5 831 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 A0A1W2PPW3 197 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 PHGDHO43175 533 aaKnown RBP15.64■□□□□ 0.09
PTBP1-204ENST00000394601 ZNF623O75123 536 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 COX4I1P13073 169 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 CLCN2P51788 898 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 MPP1Q00013 466 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 SAPCD2Q86UD0 394 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 CCDC117Q8IWD4 279 aaPredicted RBP15.64■□□□□ 0.09
PTBP1-204ENST00000394601 USP33Q8TEY7 942 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 EPS8L2Q9H6S3 715 aa15.64■□□□□ 0.09
PTBP1-204ENST00000394601 KCNU1A8MYU2 1149 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 B4GALT3O60512 393 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 CELF2O95319 508 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 CTSHP09668 335 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 PCSK1P29120 753 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 THOP1P52888 689 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 NR1H2P55055 460 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 C21orf59P57076 290 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 HNRNPDQ14103 355 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 EGFLAMQ63HQ2 1017 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 NAPEPLDQ6IQ20 393 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 ESRP1Q6NXG1 681 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 AAGABQ6PD74 315 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 ZNF683Q8IZ20 524 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 PCDH20Q8N6Y1 951 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 STON2Q8WXE9 905 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 MRGPRX2Q96LB1 330 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 LENG8Q96PV6 779 aaPredicted RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 TBL1YQ9BQ87 522 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 MRPS26Q9BYN8 205 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 TIMMDC1Q9NPL8 285 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 MRPL42Q9Y6G3 142 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 KDM1AO60341 852 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 PAGE1O75459 146 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 MT-CO1P00395 513 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 HLA-DQB2P05538 268 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 CKMT2P17540 419 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 PCID2Q5JVF3 399 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 METTL21CQ5VZV1 264 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 RANBP10Q6VN20 620 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 FSTL5Q8N475 847 aaPredicted RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 DDHD1Q8NEL9 900 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 ATP6V1E2Q96A05 226 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 PCDH12Q9NPG4 1184 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 EPS15L1Q9UBC2 864 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 ANKRD6Q9Y2G4 727 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 MATN3O15232 486 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 MSI1O43347 362 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 EPHA3P29320 983 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 YAP1P46937 504 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 GRIA4P48058 902 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 NDST2P52849 883 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 CYP2A13Q16696 494 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 ARL13AQ5H913 290 aaPredicted RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 LIPMQ5VYY2 423 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 CXCL17Q6UXB2 119 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 SLC41A1Q8IVJ1 513 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 CPSF7Q8N684 471 aaKnown RBP15.63■□□□□ 0.09
PTBP1-204ENST00000394601 RDH11Q8TC12 318 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 KCTD4Q8WVF5 259 aa15.63■□□□□ 0.09
PTBP1-204ENST00000394601 LZICQ8WZA0 190 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms