RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 ZNF697Q5TEC3 545 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 ANKRA2Q9H9E1 313 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 SLC39A1Q9NY26 324 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 OR10H1Q9Y4A9 318 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 AP4B1Q9Y6B7 739 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 ANXA5P08758 320 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 PPM1AP35813 382 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 HELQQ8TDG4 1101 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 RIT1Q92963 219 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 IRF2BPLQ9H1B7 796 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 RSPH9Q9H1X1 276 aaPredicted RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 ASTN2O75129 1339 aaPredicted RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 CBX6O95503 412 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 RORCP51449 518 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 ST3GAL1Q11201 340 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 SCGB2A2Q13296 93 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 SGCGQ13326 291 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 TBC1D25Q3MII6 688 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 GLT6D1Q7Z4J2 308 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 METTL16Q86W50 562 aaKnown RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 KAT2BQ92831 832 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 PPP3R2Q96LZ3 170 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 C19orf12Q9NSK7 152 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 FAM105AQ9NUU6 356 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 IFT80Q9P2H3 777 aaPredicted RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 ABCD2Q9UBJ2 740 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 ABHD14A-ACY1A0A1B0GW23 586 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 RRN3P2A6NIE6 340 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 ETS2P15036 469 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 KCNA5P22460 613 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 CD40LGP29965 261 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 CDH5P33151 784 aaPredicted RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 MAPK12P53778 367 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 PRKG2Q13237 762 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 DUS1LQ6P1R4 473 aaKnown RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 APOBEC3FQ8IUX4 373 aaKnown RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 NLGN1Q8N2Q7 840 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 CHST4Q8NCG5 386 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 CPNE2Q96FN4 548 aaPredicted RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 AGRPO00253 132 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 AVILO75366 819 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 SLC16A8O95907 504 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 CYP4B1P13584 511 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 NPTX2P47972 431 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 TXNL4AP83876 142 aaKnown RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 AIMP2Q13155 320 aaKnown RBP13.47□□□□□ -0.25
USP49-203ENST00000394253 BBS1Q8NFJ9 593 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 OR10H5Q8NGA6 315 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 VCPIP1Q96JH7 1222 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 SETD4Q9NVD3 440 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 MAGEL2Q9UJ55 1249 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 PCDHGB5Q9Y5G0 923 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 DGKBQ9Y6T7 804 aa13.47□□□□□ -0.25
USP49-203ENST00000394253 MAGEC1O60732 1142 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 ZC3H11AO75152 810 aaKnown RBP eCLIP13.46□□□□□ -0.252e-6■■■■□ 20.6
USP49-203ENST00000394253 IFNA21P01568 189 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 TC2NQ8N9U0 490 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 NXNL1Q96CM4 212 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 LPIN3Q9BQK8 851 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 REEP2Q9BRK0 252 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 ZNF717Q9BY31 904 aaPredicted RBP13.46□□□□□ -0.25
USP49-203ENST00000394253 L2HGDHQ9H9P8 463 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 NKIRAS2Q9NYR9 191 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 MAP10Q9P2G4 905 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 SCN2AQ99250 2005 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 TOPBP1Q92547 1522 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 ZSCAN5BA6NJL1 495 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 NDUFAF4Q9P032 175 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 BHMG1C9JSJ3 638 aaPredicted RBP13.46□□□□□ -0.25
USP49-203ENST00000394253 BTN3A1O00481 513 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 NUDT7P0C024 238 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 SAGP10523 405 aaPredicted RBP13.46□□□□□ -0.25
USP49-203ENST00000394253 ALG10BQ5I7T1 473 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 C6orf183Q5T699 404 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 PTAR1Q7Z6K3 402 aaPredicted RBP13.46□□□□□ -0.25
USP49-203ENST00000394253 ANKFN1Q8N957 763 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 GIMAP5Q96F15 307 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 TRHDEQ9UKU6 1024 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 A2MP01023 1474 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 A0A096LPK6 155 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 ITGA4P13612 1032 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 CBWD6Q4V339 395 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
USP49-203ENST00000394253 ZNF730Q6ZMV8 503 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 PNLDC1Q8NA58 520 aaKnown RBP13.46□□□□□ -0.25
USP49-203ENST00000394253 TXN2Q99757 166 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 ZNF780BQ9Y6R6 833 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 A0A087WZ62 844 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 CCRL2O00421 344 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 IFNA4P05014 189 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 DNASE1L1P49184 302 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 AGAP11Q8TF27 550 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 PTTG2Q9NZH5 202 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 ZNF69Q9UC07 566 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 PCDHA3Q9Y5H8 950 aa13.46□□□□□ -0.25
USP49-203ENST00000394253 DGKAP23743 735 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 MAGEA8P43361 318 aa13.46□□□□□ -0.26
USP49-203ENST00000394253 BOP1Q14137 746 aaKnown RBP13.46□□□□□ -0.26
USP49-203ENST00000394253 STAG3L4Q8TBR4 150 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms