RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 TULP3O75386 442 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 NFICP08651 508 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 GFAPP14136 432 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PTPN3P26045 913 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 RFC2P35250 354 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 GRK3P35626 688 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 GRIA3P42263 894 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 SERPINB10P48595 397 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 EIF2B2P49770 351 aaKnown RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CCR3P51677 355 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CRADDP78560 199 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 NFKB2Q00653 900 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TMEM62Q0P6H9 643 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 SCAPQ12770 1279 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TNFAIP1Q13829 316 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 SLC14A2Q15849 920 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 FXNQ16595 210 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 ANKDD1AQ495B1 522 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CYBRD1Q53TN4 286 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 ZNF484Q5JVG2 852 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TREML2Q5T2D2 321 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TTC23Q5W5X9 447 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 MAP1SQ66K74 1059 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 JADE1Q6IE81 842 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 NEPROQ6NW34 567 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TAF2Q6P1X5 1199 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TMEM26Q6ZUK4 368 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 LACC1Q8IV20 430 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 ADGRG5Q8IZF4 528 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CENPLQ8N0S6 344 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 DNAAF3Q8N9W5 541 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 NT5C3BQ969T7 300 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TSGA13Q96PP4 275 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PHF12Q96QT6 1004 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 APBA2Q99767 749 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PRKD2Q9BZL6 878 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TSPYL2Q9H2G4 693 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 RMND5AQ9H871 391 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 NANOGQ9H9S0 305 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 HPS4Q9NQG7 708 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TRNAU1APQ9NX07 287 aaKnown RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 XPR1Q9UBH6 696 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 STAP1Q9ULZ2 295 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 AAR2Q9Y312 384 aaKnown RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CPQQ9Y646 472 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 ZNF236Q9UL36 1845 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 ISPDA4D126 451 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 C19orf81C9J6K1 198 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 UBXN8O00124 270 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 DCLK1O15075 740 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 PHGDHO43175 533 aaKnown RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 MGEA5O60502 916 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 DEAF1O75398 565 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 IPO13O94829 963 aaKnown RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 FARP2O94887 1054 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 LDLRP01130 860 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 STAG3L1P0CL83 205 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 CXCL8P10145 99 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 GOT1P17174 413 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 CKMT2P17540 419 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 TCN1P20061 433 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 ATP6V1B2P21281 511 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 MSX2P35548 267 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 LEPRP48357 1165 aaKnown RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 SLC7A2P52569 658 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 CDC20Q12834 499 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 CRY1Q16526 586 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 RAB6CQ53S08 254 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 DCAF6Q58WW2 860 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 FGD3Q5JSP0 725 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 METTL7BQ6UX53 244 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 LARP4Q71RC2 724 aaKnown RBP eCLIP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 EPHX4Q8IUS5 362 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 SLC15A4Q8N697 577 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 LRRC52Q8N7C0 313 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 CALML6Q8TD86 181 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 CHAC2Q8WUX2 184 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 TAMM41Q96BW9 452 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 L3HYPDHQ96EM0 354 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 AURKBQ96GD4 344 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 PCYT2Q99447 389 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 LGMNQ99538 433 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 RAB6CQ9H0N0 254 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 PRDM12Q9H4Q4 367 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 PLEKHA5Q9HAU0 1116 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 PARVBQ9HBI1 364 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 IARS2Q9NSE4 1012 aaKnown RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 IFT80Q9P2H3 777 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 SNX9Q9Y5X1 595 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 CROCCQ5TZA2 2017 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 CCDC78A2IDD5 438 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 ALBP02768 609 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 FGF4P08620 206 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 TFE3P19532 575 aaPredicted RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 NOS2P35228 1153 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 ARCN1P48444 511 aaKnown RBP8.25□□□□□ -1.09
PTPRR-203ENST00000378778 MBTD1Q05BQ5 628 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 TRAF2Q12933 501 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 BNIP3Q12983 259 aa8.25□□□□□ -1.09
PTPRR-203ENST00000378778 IL18R1Q13478 541 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms