RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 C16orf72Q14CZ0 275 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 PCSK7Q16549 785 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 UGP2Q16851 508 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 FAM83EQ2M2I3 478 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 ZBTB46Q86UZ6 589 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 KCTD13Q8WZ19 329 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 ISOC1Q96CN7 298 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 ZNF560Q96MR9 790 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 SLC9A7Q96T83 725 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 NDFIP2Q9NV92 336 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 GPRC5DQ9NZD1 345 aa18.11■□□□□ 0.49
GNE-201ENST00000377902 TNS1Q9HBL0 1735 aaKnown RBP18.1■□□□□ 0.49
GNE-201ENST00000377902 H0YJX3 145 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 ZSCAN9O15535 394 aaPredicted RBP18.1■□□□□ 0.49
GNE-201ENST00000377902 MTSS1O43312 755 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 SRP72O76094 671 aaKnown RBP18.1■□□□□ 0.49
GNE-201ENST00000377902 CLCN2P51788 898 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 TRAP1Q12931 704 aaKnown RBP18.1■□□□□ 0.49
GNE-201ENST00000377902 PBXIP1Q96AQ6 731 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 C12orf43Q96C57 262 aaKnown RBP18.1■□□□□ 0.49
GNE-201ENST00000377902 ZFP42Q96MM3 310 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 UHRF1Q96T88 793 aaPredicted RBP18.1■□□□□ 0.49
GNE-201ENST00000377902 TRAF6Q9Y4K3 522 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 VPS26BQ4G0F5 336 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 PPP4R4Q6NUP7 873 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 LINC00523Q86TU6 105 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 FAM35AQ86V20 835 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 C2CD4AQ8NCU7 369 aaPredicted RBP18.1■□□□□ 0.49
GNE-201ENST00000377902 FNDC8Q8TC99 324 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 EXT2Q93063 718 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 RNF34Q969K3 372 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 FAM210AQ96ND0 272 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 SOX17Q9H6I2 414 aaPredicted RBP18.1■□□□□ 0.49
GNE-201ENST00000377902 ZNF510Q9Y2H8 683 aa18.1■□□□□ 0.49
GNE-201ENST00000377902 NME4O00746 187 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 HCAR3P49019 387 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 DNAJB13P59910 316 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 SV2CQ496J9 727 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 SAMD4BQ5PRF9 694 aaKnown RBP18.09■□□□□ 0.49
GNE-201ENST00000377902 TTC33Q6PID6 262 aaPredicted RBP18.09■□□□□ 0.49
GNE-201ENST00000377902 LIMS2Q7Z4I7 341 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 GPR141Q7Z602 305 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 OFCC1Q8IZS5 231 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 PPHLN1Q8NEY8 458 aaKnown RBP18.09■□□□□ 0.49
GNE-201ENST00000377902 OR2T34Q8NGX1 318 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 OR2T3Q8NH03 318 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 PCED1BQ96HM7 432 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 FBXL20Q96IG2 436 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 VAT1Q99536 393 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 ARHGEF38Q9NXL2 777 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 MAP10Q9P2G4 905 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 SLC8A2Q9UPR5 921 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 TCAF1Q9Y4C2 921 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 SCN4AP35499 1836 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 TANC1Q9C0D5 1861 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 NR5A2O00482 541 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 SUPT7LO94864 414 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 ATE1O95260 518 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 OXTRP30559 389 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 ARL13BQ3SXY8 428 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 TBCELQ5QJ74 424 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 C8orf82Q6P1X6 216 aaPredicted RBP18.09■□□□□ 0.49
GNE-201ENST00000377902 TMEM207Q6UWW9 146 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 CHST15Q7LFX5 561 aaPredicted RBP18.09■□□□□ 0.49
GNE-201ENST00000377902 SHCBP1Q8NEM2 672 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 STON2Q8WXE9 905 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 TOP1MTQ969P6 601 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 ALG9Q9H6U8 611 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 RAD54BQ9Y620 910 aa18.09■□□□□ 0.49
GNE-201ENST00000377902 MEIS3P2A8K0S8 358 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 WARSP23381 471 aaKnown RBP18.08■□□□□ 0.49
GNE-201ENST00000377902 AFF1P51825 1210 aaKnown RBP18.08■□□□□ 0.49
GNE-201ENST00000377902 PFKPQ01813 784 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 MAPRE2Q15555 327 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 NEPROQ6NW34 567 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 LARP4Q71RC2 724 aaKnown RBP eCLIP18.08■□□□□ 0.49
GNE-201ENST00000377902 ERMP1Q7Z2K6 904 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 ANKFN1Q8N957 763 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 KLHL23Q8NBE8 558 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 SLC25A23Q9BV35 468 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 BRD8Q9H0E9 1235 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 GSTO2Q9H4Y5 243 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 DSEQ9UL01 958 aa18.08■□□□□ 0.49
GNE-201ENST00000377902 AAR2Q9Y312 384 aaKnown RBP18.08■□□□□ 0.49
GNE-201ENST00000377902 A0A087X1B8 175 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 LRRC14BA6NHZ5 514 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 ASB14A6NK59 587 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 BMP2P12643 396 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 APLP1P51693 650 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 KIF19Q2TAC6 998 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 MAP7D1Q3KQU3 841 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 BHLHA9Q7RTU4 235 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 TAC4Q86UU9 113 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 GPR180Q86V85 440 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 PIM3Q86V86 326 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 TCF12Q99081 682 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 EFHD1Q9BUP0 239 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 FSD1LQ9BXM9 530 aa18.08■□□□□ 0.48
GNE-201ENST00000377902 NAA50Q9GZZ1 169 aaKnown RBP18.08■□□□□ 0.48
GNE-201ENST00000377902 GLOD4Q9HC38 313 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms