RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 C1QTNF7Q9BXJ2 289 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 USP29Q9HBJ7 922 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 KPNA3O00505 521 aaPredicted RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SLC16A5O15375 505 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ABL1P00519 1130 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MPP7Q5T2T1 576 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SEPT12Q8IYM1 358 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CDH22Q9UJ99 828 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 R3HDM2Q9Y2K5 976 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TAF6LQ9Y6J9 622 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PP2D1A8MPX8 630 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 FAM220BPB1ANY3 271 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 FTH1P02794 183 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 GNPDA1P46926 289 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ALDH18A1P54886 795 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MRPS15P82914 257 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MAPKAPK3Q16644 382 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PDLIM7Q9NR12 457 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 NPAP1Q9NZP6 1156 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PCDHGB7Q9Y5F8 929 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 AIREO43918 545 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 GPSM1Q86YR5 675 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TARS2Q9BW92 718 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SIX2Q9NPC8 291 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CLN6Q9NWW5 311 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PRAMEF22A3QJZ6 481 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 C5orf58C9J3I9 102 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 PEX10O60683 326 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 TOP3BO95985 862 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CYP2A7P20853 494 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 MAEAQ7L5Y9 396 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 SYT11Q9BT88 431 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 BST1Q10588 318 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ADCK1Q86TW2 530 aa4.97□□□□□ -1.61
PCDH9-201ENST00000377861 CLP1Q92989 425 aaKnown RBP4.97□□□□□ -1.61
PCDH9-201ENST00000377861 ARNTLO00327 626 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.96□□□□□ -1.61
PCDH9-201ENST00000377861 OSGEPQ9NPF4 335 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 C2CD4BA6NLJ0 364 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 MFN2O95140 757 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 MAGEA11P43364 429 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 B3GNT9Q6UX72 402 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 MMP19Q99542 508 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 CCNDBP1O95273 360 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 MSL3P1P0C860 447 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 ZC2HC1CQ53FD0 456 aaPredicted RBP4.96□□□□□ -1.61
PCDH9-201ENST00000377861 KIAA0930Q6ICG6 404 aaPredicted RBP4.96□□□□□ -1.61
PCDH9-201ENST00000377861 SPATA2LQ8IUW3 424 aaPredicted RBP4.96□□□□□ -1.61
PCDH9-201ENST00000377861 ALOX15P16050 662 aaPredicted RBP4.96□□□□□ -1.61
PCDH9-201ENST00000377861 RAMP2O60895 175 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 TYSND1Q2T9J0 566 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 RANBP9Q96S59 729 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 CHCHD6Q9BRQ6 235 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 POMPQ9Y244 141 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 PIM1P11309 404 aaPredicted RBP4.96□□□□□ -1.61
PCDH9-201ENST00000377861 ATP6V1E1P36543 226 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 SREBF2Q12772 1141 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 EPGNQ6UW88 154 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 LMO3Q8TAP4 145 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 SLC35F5Q8WV83 523 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 GALNT8Q9NY28 637 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 PCSK1NQ9UHG2 260 aa4.96□□□□□ -1.61
PCDH9-201ENST00000377861 MOXD2PA6NHM9 499 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 NPC1O15118 1278 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RETP07949 1114 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CDH3P22223 829 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ACOT2P49753 483 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 AP1S1P61966 158 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CBWD6Q4V339 395 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CBWD3Q5JTY5 395 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CBWD5Q5RIA9 395 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 OR4L1Q8NH43 312 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SP140LQ9H930 580 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CHORDC1Q9UHD1 332 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 A0A1W2PP18 115 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GYS1P13807 737 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CYP2F1P24903 491 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 TLX1P31314 330 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 NAGLUP54802 743 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 PAFAH1B3Q15102 231 aaKnown RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RNF180Q86T96 592 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CACTIN-AS1Q8N1I8 211 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 SIK2Q9H0K1 926 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GORASP2Q9H8Y8 452 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ADAMTS5Q9UNA0 930 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 LOC100653049A0A140TA62 436 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 C9IYK1 514 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RNF103O00237 685 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GJA9P57773 515 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RNF219Q5W0B1 726 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 C15orf39Q6ZRI6 1047 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 RCCD1A6NED2 376 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 HMGN1P05114 100 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 GSTM3P21266 225 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 MLLT6P55198 1093 aaPredicted RBP4.96□□□□□ -1.62
PCDH9-201ENST00000377861 MOGSQ13724 837 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 CYGBQ8WWM9 190 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF554Q86TJ5 538 aa4.96□□□□□ -1.62
PCDH9-201ENST00000377861 C19orf18Q8NEA5 215 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms