RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 VOPP1Q96AW1 172 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 HDAC11Q96DB2 347 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 BMFQ96LC9 184 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 BRD8Q9H0E9 1235 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 TTLL3Q9Y4R7 772 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 HEY1Q9Y5J3 304 aa22.26■■□□□ 1.15
SRM-201ENST00000376957 SHROOM3Q8TF72 1996 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 SOWAHDA6NJG2 315 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 PPP1R12AO14974 1030 aaPredicted RBP22.25■■□□□ 1.15
SRM-201ENST00000376957 MUSKO15146 869 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 ELFN1P0C7U0 828 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 ALPPL2P10696 532 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 CYP2A6P11509 494 aaPredicted RBP22.25■■□□□ 1.15
SRM-201ENST00000376957 CDK4P11802 303 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 HTR1BP28222 390 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 MMP12P39900 470 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 LIG3P49916 1009 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 PDE1CQ14123 709 aaPredicted RBP22.25■■□□□ 1.15
SRM-201ENST00000376957 ARMC12Q5T9G4 340 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 C11orf63Q6NUN7 778 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 PARGQ86W56 976 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 CCDC13Q8IYE1 715 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 PQLC3Q8N755 202 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 ATL2Q8NHH9 583 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 BTN2A2Q8WVV5 523 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 SPOCK2Q92563 424 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 RNF25Q96BH1 459 aaPredicted RBP22.25■■□□□ 1.15
SRM-201ENST00000376957 CENPTQ96BT3 561 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 KLF6Q99612 283 aaPredicted RBP22.25■■□□□ 1.15
SRM-201ENST00000376957 NOD2Q9HC29 1040 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 RBM22Q9NW64 420 aaKnown RBP eCLIP22.25■■□□□ 1.15
SRM-201ENST00000376957 DNAJC28Q9NX36 388 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 PHTF1Q9UMS5 762 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 PCDHGC4Q9Y5F7 938 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 KNL1Q8NG31 2342 aa22.25■■□□□ 1.15
SRM-201ENST00000376957 ANKRD36A6QL64 1941 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 SPTY2D1-AS1A0A0U1RR47 76 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 POM121BA6NF01 834 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 TRAFD1O14545 582 aaPredicted RBP22.24■■□□□ 1.15
SRM-201ENST00000376957 ZRANB2O95218 330 aaKnown RBP eCLIP22.24■■□□□ 1.15
SRM-201ENST00000376957 LDOC1O95751 146 aaPredicted RBP22.24■■□□□ 1.15
SRM-201ENST00000376957 CPP00450 1065 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 FTH1P19P0C7X4 201 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 C6P13671 934 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 CR2P20023 1033 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 FECHP22830 423 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 MAXP61244 160 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 KIAA1328Q86T90 577 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 BAHD1Q8TBE0 780 aaPredicted RBP22.24■■□□□ 1.15
SRM-201ENST00000376957 SEMA3CQ99985 751 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 EVA1BQ9NVM1 165 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 DTLQ9NZJ0 730 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 BTBD3Q9Y2F9 522 aa22.24■■□□□ 1.15
SRM-201ENST00000376957 RAD51BO15315 384 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 SPINT1O43278 529 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 HTRA2O43464 458 aaPredicted RBP22.23■■□□□ 1.15
SRM-201ENST00000376957 NR2C2P49116 596 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 EPHB1P54762 984 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 PFN3P60673 137 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 GBE1Q04446 702 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 BNIP3Q12983 259 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 ARHGEF7Q14155 803 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 AGERQ15109 404 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 SLC9A4Q6AI14 798 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 USP45Q70EL2 814 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 RCOR2Q8IZ40 523 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 PGBD5Q8N414 524 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 EID2Q8N6I1 236 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 TPCN2Q8NHX9 752 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 MAML1Q92585 1016 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 RBM41Q96IZ5 413 aaKnown RBP22.23■■□□□ 1.15
SRM-201ENST00000376957 CNDP2Q96KP4 475 aaKnown RBP22.23■■□□□ 1.15
SRM-201ENST00000376957 CABIN1Q9Y6J0 2220 aa22.23■■□□□ 1.15
SRM-201ENST00000376957 MAP3K6O95382 1288 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 ITIH2P19823 946 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 CETN2P41208 172 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 PEX5P50542 639 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 BLKP51451 505 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 PPIDQ08752 370 aaKnown RBP22.22■■□□□ 1.15
SRM-201ENST00000376957 AP1B1Q10567 949 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 SHBQ15464 509 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 DPPA4Q7L190 304 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 CCDC50Q8IVM0 306 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 DUSP23Q9BVJ7 150 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 DNPEPQ9ULA0 475 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 HYOU1Q9Y4L1 999 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 SPTBN2O15020 2390 aa22.22■■□□□ 1.15
SRM-201ENST00000376957 C3orf70A6NLC5 250 aaPredicted RBP22.21■■□□□ 1.15
SRM-201ENST00000376957 GOLGA8CPA6NN73 597 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 BTNL10A8MVZ5 291 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 SDC3O75056 442 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 CSF2P04141 144 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 C1SP09871 688 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 DGKAP23743 735 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 TFDP3Q5H9I0 405 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 ZSWIM9Q86XI8 627 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 KATNAL2Q8IYT4 538 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 SLC22A18ASQ8N1D0 253 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 PLD5Q8N7P1 536 aa22.21■■□□□ 1.15
SRM-201ENST00000376957 TP53I13Q8NBR0 393 aaPredicted RBP22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms