RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 VAC14Q08AM6 782 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 LAMC2Q13753 1193 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SKIV2LQ15477 1246 aaKnown RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 HIST2H2ACQ16777 129 aaPredicted RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SH3PXD2AQ5TCZ1 1133 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 FSTL4Q6MZW2 842 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 HACD2Q6Y1H2 254 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 TAS1R3Q7RTX0 852 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 KDM1BQ8NB78 822 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SGCDQ92629 289 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SLC39A3Q9BRY0 314 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 DGCR6LQ9BY27 220 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 ING2Q9H160 280 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 CREBZFQ9NS37 354 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 PIH1D1Q9NWS0 290 aaKnown RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 ABT1Q9ULW3 272 aaKnown RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SMCHD1A6NHR9 2005 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 CCDC78A2IDD5 438 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ISPDA4D126 451 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 TMEM233B4DJY2 109 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 TK2O00142 265 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ATG7O95352 703 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 NADKO95544 446 aaPredicted RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 APOA4P06727 396 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 VDRP11473 427 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ITIH1P19827 911 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 OXTRP30559 389 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 LIMK2P53671 638 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 P2RX3P56373 397 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 TUBA1BP68363 451 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 SELPLGQ14242 412 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 SQLEQ14534 574 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 DGUOKQ16854 277 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 RAB6CQ53S08 254 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 CEP78Q5JTW2 689 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 RSBN1Q5VWQ0 802 aaPredicted RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 TUBA1AQ71U36 451 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 R3HCC1LQ7Z5L2 792 aaKnown RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ADGRG5Q8IZF4 528 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 TRPV3Q8NET8 790 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 RDH11Q8TC12 318 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 URGCPQ8TCY9 931 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 CHAC2Q8WUX2 184 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 CPXM1Q96SM3 734 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 CGRRF1Q99675 332 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ZBED2Q9BTP6 218 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 DNAI2Q9GZS0 605 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 RAB6CQ9H0N0 254 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 LRRC40Q9H9A6 602 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 MRGBPQ9NV56 204 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 MORF4L1Q9UBU8 362 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 BAG5Q9UL15 447 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 WNT10BO00744 389 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 NRP2O60462 931 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 GPC4O75487 556 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 CABYRO75952 493 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 CELF2O95319 508 aaKnown RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ALBP02768 609 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 KRT8P05787 483 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 FCGR1AP12314 374 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 IFNA8P32881 189 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 SHMT2P34897 504 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ARL1P40616 181 aaPredicted RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 SERPINB10P48595 397 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 PPP5CP53041 499 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 BST2Q10589 180 aaKnown RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 RBM48Q5RL73 367 aaKnown RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 STRA8Q7Z7C7 330 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 RALGPS2Q86X27 583 aaPredicted RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 TMEM151AQ8N4L1 468 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 OR7A2PQ8NGA2 310 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ANGPTL6Q8NI99 470 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 PCDH19Q8TAB3 1148 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 MUL1Q969V5 352 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 CERS2Q96G23 380 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 SLC25A23Q9BV35 468 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ADNPQ9H2P0 1102 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ANKEF1Q9NU02 776 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 EIF3LQ9Y262 564 aaKnown RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ARID2Q68CP9 1835 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ZSCAN5BA6NJL1 495 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 M0R3G1 203 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ALDH7A1P49419 539 aaKnown RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 PMF1Q6P1K2 205 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 CES3Q6UWW8 571 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 DLK2Q6UY11 383 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 GRAMD2AQ8IUY3 354 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 NAT9Q9BTE0 207 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 TASP1Q9H6P5 420 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 MOSPD1Q9UJG1 213 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 SCAF8Q9UPN6 1271 aaKnown RBP12.98□□□□□ -0.33
PRPF4-201ENST00000374198 PMF1-BGLAPU3KQ54 211 aa12.98□□□□□ -0.33
PRPF4-201ENST00000374198 ZNF646O15015 1829 aaPredicted RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 C16orf96A6NNT2 1141 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 F5H423 210 aaPredicted RBP12.97□□□□□ -0.33
PRPF4-201ENST00000374198 H0Y858 1186 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 CCRL2O00421 344 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 CCNKO75909 580 aa12.97□□□□□ -0.33
PRPF4-201ENST00000374198 DLGAP3O95886 979 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms