RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 APOBEC3BQ9UH17 382 aaKnown RBP19.42■□□□□ 0.7
TRAPPC3-204ENST00000373166 DNAI1Q9UI46 699 aa19.42■□□□□ 0.7
TRAPPC3-204ENST00000373166 HECTD1Q9ULT8 2610 aa19.42■□□□□ 0.7
TRAPPC3-204ENST00000373166 LMO7DNF2Z398 122 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 RAMP2O60895 175 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 ANXA6P08133 673 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 KRT10P13645 584 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 CCNHP51946 323 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 TPRG1LQ5T0D9 272 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 C6orf132Q5T0Z8 1188 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 ESRP1Q6NXG1 681 aaKnown RBP19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 XKR5Q6UX68 686 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 SLC35F3Q8IY50 421 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 RTL3Q8N8U3 475 aaKnown RBP19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 TBATAQ96M53 351 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 NCAPGQ9BPX3 1015 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 CCDC3Q9BQI4 270 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 MAGEH1Q9H213 219 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 CATSPERBQ9H7T0 1116 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 SYNDIG1Q9H7V2 258 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 ATXN7L1Q9ULK2 861 aaPredicted RBP19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 HPCAL4Q9UM19 191 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 AP4E1Q9UPM8 1137 aa19.41■□□□□ 0.7
TRAPPC3-204ENST00000373166 EIF3CLB5ME19 914 aaKnown RBP19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 FGF10O15520 208 aaPredicted RBP19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 PRPSAP2O60256 369 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 GCATO75600 419 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 ZMPSTE24O75844 475 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 HTR7P34969 479 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 ACVRL1P37023 503 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 GEMIN4P57678 1058 aaKnown RBP19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 TPI1P60174 286 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 NFATC3Q12968 1075 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 C1orf61Q13536 156 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 VSTM4Q8IW00 320 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 PHACTR4Q8IZ21 702 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 RBFAQ8N0V3 343 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 EIF3CQ99613 913 aaKnown RBP19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 SLC13A1Q9BZW2 595 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 TRIM7Q9C029 511 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 ZDHHC6Q9H6R6 413 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 NDFIP2Q9NV92 336 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 PCSK1NQ9UHG2 260 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 PADI4Q9UM07 663 aa19.4■□□□□ 0.7
TRAPPC3-204ENST00000373166 A0A087X0T9 212 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 CXorf51AA0A1B0GTR3 108 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 C16orf96A6NNT2 1141 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 PLD2O14939 933 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 YY2O15391 372 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 FAM228BP0C875 321 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 HNRNPH3P31942 346 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 PDX1P52945 283 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 ARF5P84085 180 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 EIF3IQ13347 325 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 POLD3Q15054 466 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 FAXCQ5TGI0 409 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 ALKBH5Q6P6C2 394 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 ZNF354CQ86Y25 554 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 PLPP6Q8IY26 295 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 EXD3Q8N9H8 876 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 ARHGEF2Q92974 986 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 ARHGEF26Q96DR7 871 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 LIN37Q96GY3 246 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 THAP2Q9H0W7 228 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 TCEAL2Q9H3H9 227 aaPredicted RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 DHX35Q9H5Z1 703 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 ZNHIT6Q9NWK9 470 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 GPATCH2LQ9NWQ4 482 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 IL17BQ9UHF5 180 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 FCF1Q9Y324 198 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 PCDHGA7Q9Y5G6 932 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 TDRD6O60522 2096 aaKnown RBP19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 NAV2Q8IVL1 2488 aa19.39■□□□□ 0.69
TRAPPC3-204ENST00000373166 TMX2-CTNND1H3BSU7 103 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 EFSO43281 561 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 MIPP30301 263 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 ABL2P42684 1182 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 YPEL5P62699 121 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 TSR1Q2NL82 804 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 ZNF805Q5CZA5 627 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 CCDC122Q5T0U0 273 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 ERMARDQ5T6L9 678 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 USP53Q70EK8 1073 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 RYBPQ8N488 228 aaPredicted RBP19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 FBXO39Q8N4B4 442 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 OR8K1Q8NGG5 319 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 SCG3Q8WXD2 468 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 ISG20Q96AZ6 181 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 CENPTQ96BT3 561 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 DNAJC7Q99615 494 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 ARHGAP9Q9BRR9 750 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 SNRNP25Q9BV90 132 aaKnown RBP19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 LRRC61Q9BV99 259 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 TM6SF2Q9BZW4 377 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 STRADBQ9C0K7 418 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 DEF6Q9H4E7 631 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 DONSONQ9NYP3 566 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 DOLKQ9UPQ8 538 aa19.38■□□□□ 0.69
TRAPPC3-204ENST00000373166 ZSCAN5CA6NGD5 496 aaPredicted RBP19.37■□□□□ 0.69
TRAPPC3-204ENST00000373166 WASH4PA8MWX3 477 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms