RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 HECTD1Q9ULT8 2610 aa15.15■□□□□ 0.02
LMO4-201ENST00000370542 TMEM131Q92545 1883 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 LRRD1A4D1F6 860 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 ANKRD62A6NC57 917 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 VILLO15195 856 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 DIAPH2O60879 1101 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 ERBB2P04626 1255 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 GOT1P17174 413 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 ABCB4P21439 1286 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 C5AR1P21730 350 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 CTNNA2P26232 953 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 MZF1P28698 734 aaPredicted RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 NOS2P35228 1153 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 SCNN1AP37088 669 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 GABRB2P47870 512 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 CCR5P51681 352 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 SH3BGRP55822 239 aaPredicted RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 SLC6A3Q01959 620 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 AUHQ13825 339 aaKnown RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 SETDB1Q15047 1291 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 PDCD2Q16342 344 aaPredicted RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 CYP1B1Q16678 543 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 KCNT1Q5JUK3 1230 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 ARTNQ5T4W7 220 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 SEL1L2Q5TEA6 688 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 OTUD1Q5VV17 481 aaPredicted RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 FAM183BPQ6ZVS7 135 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 ZDHHC17Q8IUH5 632 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 MMAAQ8IVH4 418 aaKnown RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 RIBC1Q8N443 379 aaPredicted RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 AADATQ8N5Z0 425 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 OR2T34Q8NGX1 318 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 SLC30A5Q8TAD4 765 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 CKAP2Q8WWK9 683 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 UBL7Q96S82 380 aaPredicted RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 NPY6RQ99463 290 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 CDC6Q99741 560 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 TUBB6Q9BUF5 446 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 STK33Q9BYT3 514 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 EPB41L4BQ9H329 900 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 RRN3Q9NYV6 651 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 WHRNQ9P202 907 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 DNAJC12Q9UKB3 198 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 APOBEC2Q9Y235 224 aaKnown RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 TBC1D30Q9Y2I9 924 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 RAXQ9Y2V3 346 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 LRRC42Q9Y546 428 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 ZNF462Q96JM2 2506 aa15.14■□□□□ 0.01
LMO4-201ENST00000370542 NYNRINQ9P2P1 1898 aaKnown RBP15.14■□□□□ 0.01
LMO4-201ENST00000370542 KNTC1P50748 2209 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 PTPRBP23467 1997 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 A0A1W2PP55 124 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 A0A1W2PR77 199 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 RIPK2O43353 540 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 LATO43561 262 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ATP9BO43861 1147 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 DFNA5O60443 496 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 PLXNA2O75051 1894 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 DAB1O75553 588 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ADH1BP00325 375 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 PECAM1P16284 738 aaPredicted RBP15.13■□□□□ 0.01
LMO4-201ENST00000370542 DRD3P35462 400 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 SOX5P35711 763 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 PTGIRP43119 386 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 STK19P49842 368 aaPredicted RBP15.13■□□□□ 0.01
LMO4-201ENST00000370542 CCNHP51946 323 aaPredicted RBP15.13■□□□□ 0.01
LMO4-201ENST00000370542 SNX16P57768 344 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 BPIFB4P59827 614 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 SLC29A2Q14542 456 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ELAVL3Q14576 367 aaKnown RBP15.13■□□□□ 0.01
LMO4-201ENST00000370542 SUZ12Q15022 739 aaKnown RBP15.13■□□□□ 0.01
LMO4-201ENST00000370542 TAF11Q15544 211 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 RABGAP1LQ5R372 815 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ANKRD20A2Q5SQ80 823 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ANKRD20A1Q5TYW2 823 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ANKRD20A3Q5VUR7 823 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 NCEH1Q6PIU2 408 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ZDHHC24Q6UX98 284 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 BNIPLQ7Z465 357 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 EGFL6Q8IUX8 553 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ZNF683Q8IZ20 524 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 STK40Q8N2I9 435 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 BBOF1Q8ND07 529 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 OR52K2Q8NGK3 314 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 SNX19Q92543 992 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 SLCO2A1Q92959 643 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 RNF25Q96BH1 459 aaPredicted RBP15.13■□□□□ 0.01
LMO4-201ENST00000370542 NAF1Q96HR8 494 aaKnown RBP15.13■□□□□ 0.01
LMO4-201ENST00000370542 RPL10LQ96L21 214 aaKnown RBP15.13■□□□□ 0.01
LMO4-201ENST00000370542 MAGEB18Q96M61 343 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 CCDC77Q9BR77 488 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 FEM1AQ9BSK4 669 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 FOXP3Q9BZS1 431 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 VCXQ9H320 206 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 ARHGEF38Q9NXL2 777 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 CTTNBP2NLQ9P2B4 639 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 HS3ST4Q9Y661 456 aa15.13■□□□□ 0.01
LMO4-201ENST00000370542 TLDC2A0PJX2 215 aa15.12■□□□□ 0.01
LMO4-201ENST00000370542 LRRC72A6NJI9 287 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms