RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 CCDC185Q8N715 623 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 SMYD1Q8NB12 490 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 OR4L1Q8NH43 312 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 MIEF2Q96C03 454 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 CERS2Q96G23 380 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 MRPS26Q9BYN8 205 aaKnown RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 PRG2P13727 222 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 PRLRP16471 622 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 LPOP22079 712 aaPredicted RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 PTPN4P29074 926 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 FRG1Q14331 258 aaKnown RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 KLHL12Q53G59 568 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 ZCCHC9Q8N567 271 aaKnown RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 ETNPPLQ8TBG4 499 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 MKL1Q969V6 931 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 SCLYQ96I15 445 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 BRINP2Q9C0B6 783 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 RXFP1Q9HBX9 757 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 DEC1Q9P2X7 70 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 OGDHLQ9ULD0 1010 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 A0A0U1RQJ8 604 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 PSMD11O00231 422 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 HNRNPLP14866 589 aaKnown RBP eCLIP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 TAF5Q15542 800 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 ZIK1Q3SY52 487 aaPredicted RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 UBE2R2Q712K3 238 aaPredicted RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 EIF3MQ7L2H7 374 aaKnown RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 PRSS58Q8IYP2 241 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 NKAPQ8N5F7 415 aaKnown RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 UBE2E3Q969T4 207 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 VPS4AQ9UN37 437 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 ZFP37Q9Y6Q3 630 aaPredicted RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 LOC100506127A0A0U1RQW1 187 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 GLTPD2A6NH11 291 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 AP3D1O14617 1153 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 ENPP3O14638 875 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 KPNA5O15131 536 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 CHADO15335 359 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 CLUP10909 449 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 HOXA10P31260 410 aaPredicted RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 FOXM1Q08050 763 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 ARMC4Q5T2S8 1044 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 LYPLAL1Q5VWZ2 237 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 PRSS55Q6UWB4 352 aaPredicted RBP8.59□□□□□ -1.03
ABCA4-201ENST00000370225 PAGE2Q7Z2X7 111 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 TMPRSS11BQ86T26 416 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 DDHD1Q8NEL9 900 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 NEK7Q8TDX7 302 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 UBASH3BQ8TF42 649 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 STARD8Q92502 1023 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 B3GALT6Q96L58 329 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 RNF157Q96PX1 679 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 KLHL25Q9H0H3 589 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 DPEP2Q9H4A9 486 aa8.59□□□□□ -1.03
ABCA4-201ENST00000370225 ZMYM2Q9UBW7 1377 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ITGB5P18084 799 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 PRKG2Q13237 762 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 KLHL17Q6TDP4 642 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 RPTNQ6XPR3 784 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 OTOP3Q7RTS5 596 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 GPR135Q8IZ08 494 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 PYDC1Q8WXC3 89 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ATL1Q8WXF7 558 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 GPR20Q99678 358 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 SH3GL2Q99962 352 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 KIFC1Q9BW19 673 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 SATB2Q9UPW6 733 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 SHBGP04278 402 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 HGFP14210 728 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ACADSP16219 412 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ERCC2P18074 760 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 GRM5P41594 1212 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 NAGLUP54802 743 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ITGB3BPQ13352 177 aaPredicted RBP8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ANKRD23Q86SG2 305 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 LNX1Q8TBB1 728 aaPredicted RBP8.58□□□□□ -1.04
ABCA4-201ENST00000370225 PNPT1Q8TCS8 783 aaKnown RBP8.58□□□□□ -1.04
ABCA4-201ENST00000370225 SGK2Q9HBY8 427 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 LIASO43766 372 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ULK1O75385 1050 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 MATN4O95460 622 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 TOP3BO95985 862 aaKnown RBP8.58□□□□□ -1.04
ABCA4-201ENST00000370225 MARCKSL1P49006 195 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 TMED10P49755 219 aaKnown RBP8.58□□□□□ -1.04
ABCA4-201ENST00000370225 MRPS22P82650 360 aaKnown RBP8.58□□□□□ -1.04
ABCA4-201ENST00000370225 SEMG2Q02383 582 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 RBBP4Q09028 425 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 AKIRIN2Q53H80 203 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 SNX30Q5VWJ9 437 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 VGLL2Q8N8G2 317 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 LRRN4CLQ8ND94 238 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ZFP28Q8NHY6 868 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 NELL1Q92832 810 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 DCUN1D5Q9BTE7 237 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 DDX20Q9UHI6 824 aaKnown RBP8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF510Q9Y2H8 683 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 FAM237BA0A1B0GVD1 139 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 ATP6AP2A0A1C7CYW4 349 aa8.58□□□□□ -1.04
ABCA4-201ENST00000370225 CARNS1A5YM72 827 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms