RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 NKAPLQ5M9Q1 402 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DNLZQ5SXM8 178 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 NMRAL1Q9HBL8 299 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SLC17A6Q9P2U8 582 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 C2CD2Q9Y426 696 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 KCNN4O15554 427 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 THRBP10828 461 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PROSER3Q2NL68 480 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SLC38A2Q96QD8 506 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PPA2Q9H2U2 334 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SAMD4AQ9UPU9 718 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ANXA8P13928 327 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MYL12AP19105 171 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PPP2R1BP30154 601 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 AGKQ53H12 422 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 LINGO4Q6UY18 593 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 CATSPER4Q7RTX7 472 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ANO3Q9BYT9 981 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DIP2AQ14689 1571 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 G3V2T6 193 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 BBOX1O75936 387 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 MT-ND2P03891 347 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TPTEP56180 551 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TAS2R31P59538 309 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TMEM192Q8IY95 271 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DEPDC1BQ8WUY9 529 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PRMT6Q96LA8 375 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 COG8Q96MW5 612 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 GTPBP2Q9BX10 602 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 UBA6A0AVT1 1052 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 KIF28PB7ZC32 967 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SCELO95171 688 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 HALP42357 657 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RTL10Q7L3V2 364 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PEG10Q86TG7 708 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RAVER1Q8IY67 606 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 OXR1Q8N573 874 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 UBASH3BQ8TF42 649 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 GNAT1P11488 350 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 KCNC3Q14003 757 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DOK7Q18PE1 504 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TCEAL5Q5H9L2 206 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TSTD2Q5T7W7 516 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TATDN1Q6P1N9 297 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DCXRQ7Z4W1 244 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 DENND1AQ8TEH3 1009 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 IL6STP40189 918 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 VEGFCP49767 419 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RPL14P50914 215 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 POU5F1BQ06416 359 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RASGEF1AQ8N9B8 481 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ETNPPLQ8TBG4 499 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 REXO2Q9Y3B8 237 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PDCD5O14737 125 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 LCMT2O60294 686 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 STARD3Q14849 445 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 LRRN1Q6UXK5 716 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TMPRSS11BQ86T26 416 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 NGLY1Q96IV0 654 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PLCL2Q9UPR0 1127 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 NEMP1O14524 444 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ADAM10O14672 748 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 TO15178 435 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 USF2Q15853 346 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 OR6Q1Q8NGQ2 317 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 ERVK-19Q9WJR5 959 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 M0R036 132 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 COL9A3Q14050 684 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 RAPH1Q70E73 1250 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 CCNL2Q96S94 520 aaPredicted RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 EXOSC4Q9NPD3 245 aaKnown RBP3.78□□□□□ -1.8
SYNE1-207ENST00000367255 SIK3Q9Y2K2 1263 aa3.78□□□□□ -1.8
SYNE1-207ENST00000367255 PCP4L1A6NKN8 68 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 HNRNPDLO14979 420 aaKnown RBP3.78□□□□□ -1.81
SYNE1-207ENST00000367255 HLA-DPB1P04440 258 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 DBTP11182 482 aaKnown RBP3.78□□□□□ -1.81
SYNE1-207ENST00000367255 NFYCQ13952 458 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 TCEA2Q15560 299 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 ZPBP2Q6X784 338 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 PROX1Q92786 737 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 SEMA6AQ9H2E6 1030 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 ZNF221Q9UK13 617 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 TBC1D30Q9Y2I9 924 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 OIP5O43482 229 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 SNAP29O95721 258 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 IFI30P13284 250 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 PDPK2PQ6A1A2 396 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 EGFL8Q99944 293 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 MAGIXQ9H6Y5 334 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 VPS4AQ9UN37 437 aa3.78□□□□□ -1.81
SYNE1-207ENST00000367255 CIB4A0PJX0 185 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CCNT1O60563 726 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 FAAP100Q0VG06 881 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CHADLQ6NUI6 762 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 ASB18Q6ZVZ8 466 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 SLITRK2Q9H156 845 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 CA12O43570 354 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 OSBPP22059 807 aa3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PSMA6P60900 246 aaKnown RBP3.77□□□□□ -1.81
SYNE1-207ENST00000367255 PIGWQ7Z7B1 504 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms