RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 SFMBT1Q9UHJ3 866 aa12.1□□□□□ -0.47
CDC42BPA-203ENST00000366766 H3BN98 237 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 CDK18Q07002 472 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 PMF1Q6P1K2 205 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 NECAB2Q7Z6G3 386 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 NUAK2Q9H093 628 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 VWA7Q9Y334 891 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 DDX60Q8IY21 1712 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TULP3O75386 442 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TFRCP02786 760 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 ADARP55265 1226 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 MZT2AQ6P582 158 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 PTGR2Q8N8N7 351 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 WDR36Q8NI36 951 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TDRD1Q9BXT4 1180 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 C1orf232A0A0U1RR37 186 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 ARF4P18085 180 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 PTX3P26022 381 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TM4SF1P30408 202 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TLX1P31314 330 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 FMO4P31512 558 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 DLG1Q12959 904 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 MZT2BQ6NZ67 158 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 PACS1Q6VY07 963 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZNF621Q6ZSS3 439 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 SERPINB7O75635 380 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 RNASEH2BQ5TBB1 312 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 C6orf62Q9GZU0 229 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 SNX8Q9Y5X2 465 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 KCNE2Q9Y6J6 123 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 MYCP01106 439 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 POMCP01189 267 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 FAM163BP0C2L3 166 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 OR4L1Q8NH43 312 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 ADAM32Q8TC27 787 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 FOXR1Q6PIV2 292 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 SPPL2BQ8TCT7 592 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZNF607Q96SK3 696 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 CIPCQ9C0C6 399 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 BTBD3Q9Y2F9 522 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 GPIP06744 558 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TAS2R40P59535 323 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 BNIP1Q12981 228 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 NEDD8Q15843 81 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 VPS4AQ9UN37 437 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 ERGIC3Q9Y282 383 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 GJB6O95452 261 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 ARL2P36404 184 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 CYP2R1Q6VVX0 501 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 OR52L1Q8NGH7 329 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 CLEC4MQ9H2X3 399 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TRAF6Q9Y4K3 522 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 MAFBQ9Y5Q3 323 aaPredicted RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TJP1Q07157 1748 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 STK25O00506 426 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 PNLIPRP1P54315 467 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZFPM1Q8IX07 1006 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 KAT2BQ92831 832 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 MYLPFQ96A32 169 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 SKA1Q96BD8 255 aa12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 TEFMQ96QE5 360 aaKnown RBP12.09□□□□□ -0.47
CDC42BPA-203ENST00000366766 GSC2O15499 205 aa12.08□□□□□ -0.47
CDC42BPA-203ENST00000366766 LRCH4O75427 683 aa12.08□□□□□ -0.47
CDC42BPA-203ENST00000366766 ADRA1BP35368 520 aa12.08□□□□□ -0.47
CDC42BPA-203ENST00000366766 CSNK2BP67870 215 aa12.08□□□□□ -0.47
CDC42BPA-203ENST00000366766 BNC1Q01954 994 aa12.08□□□□□ -0.47
CDC42BPA-203ENST00000366766 FAM35AQ86V20 835 aa12.08□□□□□ -0.47
CDC42BPA-203ENST00000366766 SLC44A2Q8IWA5 706 aaPredicted RBP12.08□□□□□ -0.47
CDC42BPA-203ENST00000366766 PRKAG3Q9UGI9 489 aa12.08□□□□□ -0.47
CDC42BPA-203ENST00000366766 IRF8Q02556 426 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 TRMT11Q7Z4G4 463 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 CSGALNACT1Q8TDX6 532 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 CSPG4P5Q96PW8 444 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 URADA6NGE7 173 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 NRP2O60462 931 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 C16orf72Q14CZ0 275 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 PAN2Q504Q3 1202 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 P2RY11Q96G91 374 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 NOCTQ9UK39 431 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 TISP43B9A030 160 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 ENTPD5O75356 428 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 PLD5Q8N7P1 536 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 TRAPPC12Q8WVT3 735 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 SEMA3CQ99985 751 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 IFT80Q9P2H3 777 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 PRDM4Q9UKN5 801 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 PNMA8BQ9ULN7 279 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 HGFP14210 728 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 ECM1Q16610 540 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 EIF3MQ7L2H7 374 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 BEND7Q8N7W2 519 aaPredicted RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 RBM4BQ9BQ04 359 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 RBM4Q9BWF3 364 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 GRIP2Q9C0E4 1043 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 DMAC2Q9NW81 257 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 FAM50BQ9Y247 325 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 C4BPAP04003 597 aaKnown RBP12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 ACOX1Q15067 660 aa12.08□□□□□ -0.48
CDC42BPA-203ENST00000366766 ZC3H12AQ5D1E8 599 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms