RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CCND3P30281 292 aaPredicted RBP18.66■□□□□ 0.58
CLIP2-202ENST00000361545 LRPAP1P30533 357 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 DPP10Q8N608 796 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 SLC4A5Q9BY07 1137 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 FZD8Q9H461 694 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 CD248Q9HCU0 757 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 SNX15Q9NRS6 342 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 VWA7Q9Y334 891 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 ZNF711Q9Y462 761 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 SHPRHQ149N8 1683 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 ARVCFO00192 962 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 NOL4O94818 638 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 ZCCHC18P0CG32 403 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 HNRNPLP14866 589 aaKnown RBP eCLIP18.66■□□□□ 0.58
CLIP2-202ENST00000361545 CYP4F8P98187 520 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 TAF5Q15542 800 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 AP5B1Q2VPB7 878 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 TRMT5Q32P41 509 aaKnown RBP18.66■□□□□ 0.58
CLIP2-202ENST00000361545 TMEM63BQ5T3F8 832 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 CLYBLQ8N0X4 340 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 MRPL57Q9BQC6 102 aaKnown RBP18.66■□□□□ 0.58
CLIP2-202ENST00000361545 BATF3Q9NR55 127 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 R3HDM2Q9Y2K5 976 aaKnown RBP18.66■□□□□ 0.58
CLIP2-202ENST00000361545 OR10H2O60403 315 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 ATG7O95352 703 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 TIGD5Q53EQ6 642 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 TMC5Q6UXY8 1006 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 ATAD3AQ9NVI7 634 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 REXO2Q9Y3B8 237 aaKnown RBP18.66■□□□□ 0.58
CLIP2-202ENST00000361545 KCNE2Q9Y6J6 123 aa18.66■□□□□ 0.58
CLIP2-202ENST00000361545 LRIG2O94898 1065 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 SP2Q02086 613 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 DSC2Q02487 901 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 FPGSQ05932 587 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 SH3D19Q5HYK7 790 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 TYW3Q6IPR3 259 aaKnown RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 TMEM192Q8IY95 271 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 KLHL4Q9C0H6 718 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 DUSP12Q9UNI6 340 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 POLR1DQ9Y2S0 133 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 ARHGEF9O43307 516 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 ERAL1O75616 437 aaKnown RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 ME2P23368 584 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 GRM3Q14832 879 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 FAM187BQ17R55 369 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 IZUMO2Q6UXV1 221 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 GPRIN3Q6ZVF9 776 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 LUZP2Q86TE4 346 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 EID3Q8N140 333 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 CYP4Z2PQ8N1L4 340 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 FAIM2Q9BWQ8 316 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 GLYATL1P3A0A0U1RQE8 302 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 SLC38A8A6NNN8 435 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 SASH3O75995 380 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 KCNH1O95259 989 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 ANGPT1Q15389 498 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 GSTA3Q16772 222 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 SPDYCQ5MJ68 293 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 GDF6Q6KF10 455 aaPredicted RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 SLC30A9Q6PML9 568 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 APTXQ7Z2E3 356 aaKnown RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 STK32CQ86UX6 486 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 ECHDC2Q86YB7 292 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 C2orf73Q8N5S3 287 aaPredicted RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 ITFG1Q8TB96 612 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 PRR23D1E9PI22 279 aaPredicted RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 PRR23D2P0DMB1 279 aaPredicted RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 GNA12Q03113 381 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 PLD5Q8N7P1 536 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 AUTS2Q8WXX7 1259 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 C11orf84Q9BUA3 381 aaPredicted RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 WRAP53Q9BUR4 548 aaKnown RBP18.65■□□□□ 0.58
CLIP2-202ENST00000361545 BDH2Q9BUT1 245 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 ACSS3Q9H6R3 686 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 CLIC5Q9NZA1 410 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 CD84Q9UIB8 345 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 PCDHGC3Q9UN70 934 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 N6AMT1Q9Y5N5 214 aa18.65■□□□□ 0.58
CLIP2-202ENST00000361545 ATP6AP2A0A1C7CYW4 349 aa18.64■□□□□ 0.58
CLIP2-202ENST00000361545 FKBP6O75344 327 aa18.64■□□□□ 0.58
CLIP2-202ENST00000361545 ATP6AP2O75787 350 aa18.64■□□□□ 0.58
CLIP2-202ENST00000361545 CDK14O94921 469 aa18.64■□□□□ 0.58
CLIP2-202ENST00000361545 KELP23276 732 aa18.64■□□□□ 0.58
CLIP2-202ENST00000361545 NCF4Q15080 339 aa18.64■□□□□ 0.58
CLIP2-202ENST00000361545 FNBP1LQ5T0N5 605 aa18.64■□□□□ 0.58
CLIP2-202ENST00000361545 KHDRBS2Q5VWX1 349 aaKnown RBP18.64■□□□□ 0.58
CLIP2-202ENST00000361545 ACTRT2Q8TDY3 377 aa18.64■□□□□ 0.58
CLIP2-202ENST00000361545 ADAMTS3O15072 1205 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 HS6ST1O60243 411 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 ADSSP30520 456 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 POLD2P49005 469 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 RPL10LQ96L21 214 aaKnown RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 PHPT1Q9NRX4 125 aaPredicted RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 FCF1Q9Y324 198 aaKnown RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 PCDHGC4Q9Y5F7 938 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 LDLRP01130 860 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 HNRNPH1P31943 449 aaKnown RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 CDH13P55290 713 aa18.64■□□□□ 0.57
CLIP2-202ENST00000361545 ZNHIT3Q15649 155 aaPredicted RBP18.64■□□□□ 0.57
CLIP2-202ENST00000361545 CASP12Q6UXS9 341 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms