RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 CYP4F8P98187 520 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CCL15Q16663 113 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 HHIPL2Q6UWX4 724 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 SPACA7Q96KW9 195 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 AIFM2Q9BRQ8 373 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 UPB1Q9UBR1 384 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 AMHP03971 560 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 IFNA6P05013 189 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 AXLP30530 894 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ZNF543Q08ER8 600 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 BNIP2Q12982 314 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 PDCD4Q53EL6 469 aaKnown RBP13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 TRIM40Q6P9F5 258 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 GCNT7Q6ZNI0 430 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 PIGKQ92643 395 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 SLC5A5Q92911 643 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CRAMP1Q96RY5 1269 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 MXRA8Q9BRK3 442 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ELOVL4Q9GZR5 314 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 RNF44Q7L0R7 432 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 PQLC1Q8N2U9 271 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 ACTL9Q8TC94 416 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 VCPIP1Q96JH7 1222 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CDADC1Q9BWV3 514 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 AGPAT3Q9NRZ7 376 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CDH7Q9ULB5 785 aa13.28□□□□□ -0.28
SRGAP3-201ENST00000360413 CYB561D2O14569 222 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 TRDMT1O14717 391 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 CATP04040 527 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 MAGEA12P43365 314 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 CA9Q16790 459 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 PARP6Q2NL67 630 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 FIGNQ5HY92 759 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 RASAL3Q86YV0 1011 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 POF1BQ8WVV4 589 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 MTFMTQ96DP5 389 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 CGRRF1Q99675 332 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 RNF38Q9H0F5 515 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 C3orf14Q9HBI5 128 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 EIF3KQ9UBQ5 218 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 PCDHGB5Q9Y5G0 923 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 GTPBP1O00178 669 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 PSEN1P49768 467 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 CDH4P55283 916 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 GLT6D1Q7Z4J2 308 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 SLC47A1Q96FL8 570 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 NOL11Q9H8H0 719 aaKnown RBP13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 CLEC4AQ9UMR7 237 aa13.27□□□□□ -0.28
SRGAP3-201ENST00000360413 MGAT1P26572 445 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 CYP2C18P33260 490 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 SMIM5Q71RC9 77 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 TMEM168Q9H0V1 697 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 SAMD4AQ9UPU9 718 aaKnown RBP13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 CLDN25C9JDP6 229 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 LRIG2O94898 1065 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 TYMPP19971 482 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 PRDX5P30044 214 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 GRM3Q14832 879 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 PTCHD4Q6ZW05 846 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 ALYREFQ86V81 257 aaKnown RBP13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 TBC1D21Q8IYX1 336 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 NXNL1Q96CM4 212 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 APBA2Q99767 749 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 GRHL1Q9NZI5 618 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 REM1O75628 298 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 CYP2F1P24903 491 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 BLMHQ13867 455 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 ZBTB8BQ8NAP8 495 aaPredicted RBP13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 SRFBP1Q8NEF9 429 aaKnown RBP13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 NEDD4LQ96PU5 975 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 BTBD9Q96Q07 612 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 HPF1Q9NWY4 346 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 SOHLH2Q9NX45 425 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 PTTG2Q9NZH5 202 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 SAMHD1Q9Y3Z3 626 aaKnown RBP13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 TMEM94Q12767 1356 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 PPP2R2BQ00005 443 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 FBXL19Q6PCT2 694 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 CST11Q9H112 138 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 NR2E3Q9Y5X4 410 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 LRRIQ1Q96JM4 1722 aa13.27□□□□□ -0.29
SRGAP3-201ENST00000360413 VAPBO95292 243 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 OR1E1P30953 314 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PDK4Q16654 411 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CNPY1Q3B7I2 92 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PHC2Q8IXK0 858 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 SLC4A11Q8NBS3 891 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 TESCQ96BS2 214 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 CBWD1Q9BRT8 395 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 INTS10Q9NVR2 710 aaKnown RBP13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 MED11Q9P086 117 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 PROSCO94903 275 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 TEX47Q8TBZ9 253 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ING5Q8WYH8 240 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 GAL3ST3Q96A11 431 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 MTMR8Q96EF0 704 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 IL22Q9GZX6 179 aa13.26□□□□□ -0.29
SRGAP3-201ENST00000360413 ARHGAP20Q9P2F6 1191 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms