RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 C1RP00736 705 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 LRG1P02750 347 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 RHOCP08134 193 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ITGA2BP08514 1039 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CTSAP10619 480 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ARNTP27540 789 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 GABRB3P28472 473 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 RENBPP51606 427 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 NEK3P51956 506 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF135P52742 658 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 NRG1Q02297 640 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MGAT5Q09328 741 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 NR1H3Q13133 447 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PDE1CQ14123 709 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF235Q14590 738 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 FXNQ16595 210 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SIRPB2Q5JXA9 342 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ADGRF1Q5T601 910 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ATXN7L2Q5T6C5 722 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 GKAP1Q5VSY0 366 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 FSTL4Q6MZW2 842 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CXorf57Q6NSI4 855 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TIGD7Q6NT04 549 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 KDELC1Q6UW63 502 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TMEM135Q86UB9 458 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 BBS7Q8IWZ6 715 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CACNA2D3Q8IZS8 1091 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TNS4Q8IZW8 715 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PLD6Q8N2A8 252 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF276Q8N554 614 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 DCLK2Q8N568 766 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 C12orf76Q8N812 135 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ARRDC2Q8TBH0 407 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 BLOC1S5Q8TDH9 187 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SH3RF2Q8TEC5 729 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SREK1Q8WXA9 508 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF75CPQ92670 426 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ERLEC1Q96DZ1 483 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 IMP4Q96G21 291 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 APOPT1Q96IL0 206 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MYRFLQ96LU7 910 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 VAT1Q99536 393 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PITPNM3Q9BZ71 974 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 TM6SF2Q9BZW4 377 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ACTR5Q9H9F9 607 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 NOD2Q9HC29 1040 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ZMAT5Q9UDW3 170 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 MARCOQ9UEW3 520 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 DCTN4Q9UJW0 460 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SOX13Q9UN79 622 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 CHKBQ9Y259 395 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 FCF1Q9Y324 198 aaKnown RBP5.13□□□□□ -1.59
ATXN3-202ENST00000359366 PCDHGC4Q9Y5F7 938 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ACTL7BQ9Y614 415 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ARL5AQ9Y689 179 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 SLC4A7Q9Y6M7 1214 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 DENND4CQ5VZ89 1909 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 USP34Q70CQ2 3546 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ATG2BQ96BY7 2078 aa5.13□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 TRIM64CA6NLI5 447 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 FAM25EA8MYX2 175 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 TRIM24O15164 1050 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 GPR39O43194 453 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 CACNG3O60359 315 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 GREM1O60565 184 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 RASSF9O75901 435 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 CA3P07451 260 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 PDHA1P08559 390 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 RPSAP08865 295 aaKnown RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 KITP10721 976 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 TSHRP16473 764 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 PPM1AP35813 382 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 ETV4P43268 484 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 GLRBP48167 497 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 ARSDP51689 593 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 GEMP55040 296 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 HTRA4P83105 476 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 SLC18A2Q05940 514 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 ZNF177Q13360 481 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 CAMK1Q14012 370 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 HNRNPDQ14103 355 aaKnown RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 ANO4Q32M45 955 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 EML3Q32P44 896 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 SPANXN3Q5MJ09 141 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 THOC7Q6I9Y2 204 aaKnown RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 RANBP10Q6VN20 620 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 PTAR1Q7Z6K3 402 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 TMC8Q8IU68 726 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 SLC41A1Q8IVJ1 513 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 MFSD6LQ8IWD5 586 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 APCDD1Q8J025 514 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 ZBTB8BQ8NAP8 495 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 PDZD8Q8NEN9 1154 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 ANKK1Q8NFD2 765 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 LRRC8CQ8TDW0 803 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 DDI1Q8WTU0 396 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 RPL10LQ96L21 214 aaKnown RBP5.12□□□□□ -1.59
ATXN3-202ENST00000359366 MAGEB18Q96M61 343 aa5.12□□□□□ -1.59
ATXN3-202ENST00000359366 NDNQ99608 321 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms