RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 KDELC2Q7Z4H8 507 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 KIAA0907Q7Z7F0 614 aaPredicted RBP13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 TMEM135Q86UB9 458 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 RASSF3Q86WH2 238 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 LRRC6Q86X45 466 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 CNPY4Q8N129 248 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 PLCD3Q8N3E9 789 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 CPA6Q8N4T0 437 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 PPM1NQ8N819 430 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 SLC44A1Q8WWI5 657 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 COL26A1Q96A83 441 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 MRRFQ96E11 262 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 CERS2Q96G23 380 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 KXD1Q9BQD3 176 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 TRIM56Q9BRZ2 755 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 TDRD1Q9BXT4 1180 aaKnown RBP13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 CEP44Q9C0F1 390 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 MOCS1Q9NZB8 636 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 TBK1Q9UHD2 729 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 FAM169AQ9Y6X4 670 aa13.96□□□□□ -0.17
PDLIM5-203ENST00000359265 MUC22E2RYF6 1773 aaPredicted RBP13.96□□□□□ -0.18
PDLIM5-203ENST00000359265 EP300Q09472 2414 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 CHD8Q9HCK8 2581 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 IQANK1A0A1B0GTG1 560 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 K7ERQ8 282 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 MT-CO1P00395 513 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 C1QAP02745 245 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ASLP04424 464 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 SRCP12931 536 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 PAMP19021 973 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 POLR2EP19388 210 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 MAGOHP61326 146 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 SNRPD1P62314 119 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 GALNT3Q14435 633 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ATXN7L2Q5T6C5 722 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 MBLAC2Q68D91 279 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 TRMT10BQ6PF06 316 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ADGRD1Q6QNK2 874 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 PARM1Q6UWI2 310 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 CES3Q6UWW8 571 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 SLC26A11Q86WA9 606 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 PCDH20Q8N6Y1 951 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 NAT16Q8N8M0 369 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 DCAKDQ8WVC6 231 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 FGF14Q92915 247 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 NXPE3Q969Y0 559 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ISG20Q96AZ6 181 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ZFYVE19Q96K21 471 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 TRIB3Q96RU7 358 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 FAM83CQ9BQN1 747 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 TRMT61BQ9BVS5 477 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 PHF7Q9BWX1 381 aaPredicted RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ADGRE3Q9BY15 652 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 TM6SF2Q9BZW4 377 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 EBF3Q9H4W6 596 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ECT2Q9H8V3 914 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 PPANQ9NQ55 473 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 CHRAC1Q9NRG0 131 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ZNF180Q9UJW8 692 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 FBXO10Q9UK96 956 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 RAI2Q9Y5P3 530 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 CHD6Q8TD26 2715 aa13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 ZNF106Q9H2Y7 1883 aaKnown RBP13.95□□□□□ -0.18
PDLIM5-203ENST00000359265 SCN8AQ9UQD0 1980 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 ANHXE9PGG2 379 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 SMAD6O43541 496 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 RRP9O43818 475 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 GSRP00390 522 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 KRT15P19012 456 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 NMBRP28336 390 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 HPDP32754 393 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 CTSOP43234 321 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 STK19P49842 368 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 SERPINB9P50453 376 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 CBX1P83916 185 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 ECT2LQ008S8 904 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 TRAF2Q12933 501 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 HTR4Q13639 388 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 LGSNQ5TDP6 509 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 GRAMD4Q6IC98 578 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 KDM7AQ6ZMT4 941 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 NLRP9Q7RTR0 991 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 ADIPOR2Q86V24 386 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 OR2AP1Q8NGE2 309 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 MFSD3Q96ES6 412 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 RPL10LQ96L21 214 aaKnown RBP13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 FCRL3Q96P31 734 aaPredicted RBP13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 HPS4Q9NQG7 708 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 SMYD2Q9NRG4 433 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 SENP1Q9P0U3 644 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 TXNDC16Q9P2K2 825 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 SLC8A2Q9UPR5 921 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 ERVW-1Q9UQF0 538 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 CHKBQ9Y259 395 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 SLC27A6Q9Y2P4 619 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 NUMBLQ9Y6R0 609 aa13.94□□□□□ -0.18
PDLIM5-203ENST00000359265 MAP1BP46821 2468 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 ZCWPW2A0A1B0GU75 182 aa13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 CXorf49A8MYA2 514 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-203ENST00000359265 SOCS5O75159 536 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms