RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 PRAMEF12O95522 483 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 SERPINF2P08697 491 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 ALPIP09923 528 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 RALBP11234 206 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 FAM109BQ6ICB4 259 aaPredicted RBP17.74■□□□□ 0.43
NPAS3-202ENST00000356141 CRLF3Q8IUI8 442 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 TMEM106CQ9BVX2 250 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 NMRAL1Q9HBL8 299 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 SCUBE2Q9NQ36 999 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 SIRPGQ9P1W8 387 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 XPR1Q9UBH6 696 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 BAIAP2L1Q9UHR4 511 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 CDH22Q9UJ99 828 aa17.74■□□□□ 0.43
NPAS3-202ENST00000356141 TMCC1O94876 653 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 GOT2P00505 430 aaKnown RBP17.73■□□□□ 0.43
NPAS3-202ENST00000356141 F11P03951 625 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 SLC12A2P55011 1212 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 CDH4P55283 916 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 BNIP1Q12981 228 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 RNF43Q68DV7 783 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 PDZD8Q8NEN9 1154 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 RIN3Q8TB24 985 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 GRAMD1AQ96CP6 724 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 PDFQ9HBH1 243 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 TREX1Q9NSU2 369 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 DCDC2Q9UHG0 476 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 COL4A4P53420 1690 aaPredicted RBP17.73■□□□□ 0.43
NPAS3-202ENST00000356141 TLL1O43897 1013 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 DIAPH2O60879 1101 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 STK19P49842 368 aaPredicted RBP17.73■□□□□ 0.43
NPAS3-202ENST00000356141 KDSRQ06136 332 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 CYTH1Q15438 398 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 POTEHQ6S545 545 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 RGS9BPQ6ZS82 235 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 MFN1Q8IWA4 741 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 CMTM8Q8IZV2 173 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 ZNF781Q8N8C0 355 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 NAT16Q8N8M0 369 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 PHF21BQ96EK2 531 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 IRAK4Q9NWZ3 460 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 GGA2Q9UJY4 613 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 SLC4A7Q9Y6M7 1214 aa17.73■□□□□ 0.43
NPAS3-202ENST00000356141 PIGNO95427 931 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 FGBP02675 491 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 ENO1P06733 434 aaKnown RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 CD1EP15812 388 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 CNTFP26441 200 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 HTR7P34969 479 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 CTSOP43234 321 aaPredicted RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 NAGLUP54802 743 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 OCRLQ01968 901 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 ATG16L1Q676U5 607 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 TIFABQ6ZNK6 161 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 CENPLQ8N0S6 344 aaPredicted RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 FSTL5Q8N475 847 aaPredicted RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 KREMEN2Q8NCW0 462 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 OR4K2Q8NGD2 314 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 HERC2P3Q9BVR0 1158 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 RHOJQ9H4E5 214 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 PRKAG2Q9UGJ0 569 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 FAM50BQ9Y247 325 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 PCDHB9Q9Y5E1 797 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 HEATR9A2RTY3 570 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 CCDC162PA2VCL2 907 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 TMEM233B4DJY2 109 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 LDB2O43679 373 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 HSPA1AP0DMV8 641 aaKnown RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 HSPA1BP0DMV9 641 aaKnown RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 CD151P48509 253 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 MAPKAPK2P49137 400 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 LACTB2Q53H82 288 aaPredicted RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 TPGS2Q68CL5 300 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 CLNKQ7Z7G1 428 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 POU5F2Q8N7G0 328 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 FBXO27Q8NI29 283 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 ANKRD49Q8WVL7 239 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 N4BP2L2Q92802 583 aaPredicted RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 MARK4Q96L34 752 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 OSBPL1AQ9BXW6 950 aa17.72■□□□□ 0.43
NPAS3-202ENST00000356141 ACE2Q9BYF1 805 aaPredicted RBP17.72■□□□□ 0.43
NPAS3-202ENST00000356141 A0A1B0GVM2 712 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 TCAF2A6NFQ2 919 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 PSMD3O43242 534 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 TIMM44O43615 452 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 T-ENOLP0DO92 83 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 STMN1P16949 149 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 KPNA1P52294 538 aaPredicted RBP17.71■□□□□ 0.43
NPAS3-202ENST00000356141 CDKN2DP55273 166 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 ZNF33AQ06730 810 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 GALNTL6Q49A17 601 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 CAMK1DQ8IU85 385 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 MDGA1Q8NFP4 955 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 PPP4R1Q8TF05 950 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 CCDC97Q96F63 343 aaPredicted RBP17.71■□□□□ 0.43
NPAS3-202ENST00000356141 MYO15AQ9UKN7 3530 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 MEI4A8MW99 385 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 FCHO1O14526 889 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 CLDN11O75508 207 aa17.71■□□□□ 0.43
NPAS3-202ENST00000356141 PARNO95453 639 aaKnown RBP17.71■□□□□ 0.43
NPAS3-202ENST00000356141 HNRNPLP14866 589 aaKnown RBP eCLIP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms