RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 MYO19Q96H55 970 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 MRGPRX3Q96LB0 322 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 TRMT61BQ9BVS5 477 aaKnown RBP13.71□□□□□ -0.21
HOXA1-202ENST00000355633 GTSE1Q9NYZ3 720 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 SENP1Q9P0U3 644 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 TXNDC16Q9P2K2 825 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 ADAM21Q9UKJ8 722 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 SLC8A2Q9UPR5 921 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 PCDHB9Q9Y5E1 797 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 ACTL7BQ9Y614 415 aa13.71□□□□□ -0.21
HOXA1-202ENST00000355633 SOX1O00570 391 aaPredicted RBP13.71□□□□□ -0.22
HOXA1-202ENST00000355633 TRAFD1O14545 582 aaPredicted RBP13.71□□□□□ -0.22
HOXA1-202ENST00000355633 LDB2O43679 373 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 KRT37O76014 449 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 VAPBO95292 243 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 PGLSO95336 258 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 SRPRAP08240 638 aaKnown RBP13.71□□□□□ -0.22
HOXA1-202ENST00000355633 SERPINA4P29622 427 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 RECQLP46063 649 aaPredicted RBP13.71□□□□□ -0.22
HOXA1-202ENST00000355633 CCNHP51946 323 aaPredicted RBP13.71□□□□□ -0.22
HOXA1-202ENST00000355633 EPHB1P54762 984 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 QPCTQ16769 361 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 MYLK3Q32MK0 819 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 TEDDM1Q5T9Z0 273 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 EMC10Q5UCC4 262 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 Q6ZVU0 165 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 PAF1Q8N7H5 531 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 MZB1Q8WU39 189 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 TUBGCP5Q96RT8 1024 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 SELENOSQ9BQE4 189 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 RPP25Q9BUL9 199 aaKnown RBP13.71□□□□□ -0.22
HOXA1-202ENST00000355633 IARS2Q9NSE4 1012 aaKnown RBP13.71□□□□□ -0.22
HOXA1-202ENST00000355633 ELOVL2Q9NXB9 296 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 EPS15L1Q9UBC2 864 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 KIAA1549LQ6ZVL6 1849 aa13.71□□□□□ -0.22
HOXA1-202ENST00000355633 A0A1W2PPM1 405 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 H3BQ06 376 aaPredicted RBP13.7□□□□□ -0.22
HOXA1-202ENST00000355633 GOLGA8TH3BQL2 631 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 HTRA2O43464 458 aaPredicted RBP13.7□□□□□ -0.22
HOXA1-202ENST00000355633 KRT38O76015 456 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 POP4O95707 220 aaKnown RBP13.7□□□□□ -0.22
HOXA1-202ENST00000355633 CRTAMO95727 393 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 SNRPAP09012 282 aaKnown RBP13.7□□□□□ -0.22
HOXA1-202ENST00000355633 CREB1P16220 341 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 SP100P23497 879 aaPredicted RBP13.7□□□□□ -0.22
HOXA1-202ENST00000355633 ARNTP27540 789 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 SLC8A1P32418 973 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 GJA4P35212 333 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 GP5P40197 560 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 GRIA4P48058 902 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 ARCN1P48444 511 aaKnown RBP13.7□□□□□ -0.22
HOXA1-202ENST00000355633 VASPP50552 380 aaPredicted RBP13.7□□□□□ -0.22
HOXA1-202ENST00000355633 KDSRQ06136 332 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 RAD51Q06609 339 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 MESP2Q0VG99 397 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 PACS1Q6VY07 963 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 DPY19L3Q6ZPD9 716 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 GLT6D1Q7Z4J2 308 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 PLPP6Q8IY26 295 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 PEX13Q92968 403 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 AGAP2Q99490 1192 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 CPNE1Q99829 537 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 SPO11Q9Y5K1 396 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 PSAT1Q9Y617 370 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 ARL5AQ9Y689 179 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 NUMBLQ9Y6R0 609 aa13.7□□□□□ -0.22
HOXA1-202ENST00000355633 PRRT4C9JH25 899 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 BRAFP15056 766 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 CNTFP26441 200 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 OPRD1P41143 372 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 RPL26P61254 145 aaKnown RBP13.69□□□□□ -0.22
HOXA1-202ENST00000355633 ST8SIA6P61647 398 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 THOC5Q13769 683 aaKnown RBP13.69□□□□□ -0.22
HOXA1-202ENST00000355633 EIF4HQ15056 248 aaKnown RBP13.69□□□□□ -0.22
HOXA1-202ENST00000355633 PTPRNQ16849 979 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 OR13J1Q8NGT2 312 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 FRS2Q8WU20 508 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 STYXQ8WUJ0 223 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 NXPE3Q969Y0 559 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 LRCH3Q96II8 777 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 SMC6Q96SB8 1091 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 CPEB1Q9BZB8 566 aaKnown RBP13.69□□□□□ -0.22
HOXA1-202ENST00000355633 TRABDQ9H4I3 376 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 ZDHHC6Q9H6R6 413 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 CNOT10Q9H9A5 744 aaKnown RBP13.69□□□□□ -0.22
HOXA1-202ENST00000355633 NSMCE4AQ9NXX6 385 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 RPL26L1Q9UNX3 145 aaKnown RBP13.69□□□□□ -0.22
HOXA1-202ENST00000355633 KCTD3Q9Y597 815 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 SZT2Q5T011 3432 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 TTC34A8MYJ7 566 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.69□□□□□ -0.22
HOXA1-202ENST00000355633 TRIM49D1C9J1S8 452 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 MT-ND3P03897 115 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 PRAMEP78395 509 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 HTR4Q13639 388 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 BMPR2Q13873 1038 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 GRM3Q14832 879 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 TAF1AQ15573 450 aaPredicted RBP13.69□□□□□ -0.22
HOXA1-202ENST00000355633 ITPRIPL2Q3MIP1 535 aa13.69□□□□□ -0.22
HOXA1-202ENST00000355633 GRTP1Q5TC63 336 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms