RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 BCLAF3A2AJT9 711 aaKnown RBP16.08■□□□□ 0.17
PTPN11-201ENST00000351677 TBC1D3BA6NDS4 549 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 USP2O75604 605 aaPredicted RBP16.08■□□□□ 0.17
PTPN11-201ENST00000351677 CPSF6Q16630 551 aaKnown RBP eCLIP16.08■□□□□ 0.17
PTPN11-201ENST00000351677 INSCQ1MX18 579 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 SPESP1Q6UW49 350 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 CUZD1Q86UP6 607 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 DPP10Q8N608 796 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 C19orf18Q8NEA5 215 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 GPR156Q8NFN8 814 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 FNIP1Q8TF40 1166 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 IDH2P48735 452 aaKnown RBP16.08■□□□□ 0.16
PTPN11-201ENST00000351677 ABRQ12979 859 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 DUSP4Q13115 394 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 USP41Q3LFD5 358 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 RINLQ6ZS11 566 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 CLYBLQ8N0X4 340 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 SUSD6Q92537 303 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 TMEM216Q9P0N5 145 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 TMCO1Q9UM00 188 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 FGF1P05230 155 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 TNK2Q07912 1038 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 ARMC4Q5T2S8 1044 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 GK5Q6ZS86 529 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
PTPN11-201ENST00000351677 TEKT5Q96M29 485 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 REXO4Q9GZR2 422 aaKnown RBP16.08■□□□□ 0.16
PTPN11-201ENST00000351677 TRAF6Q9Y4K3 522 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 LTN1O94822 1766 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 PLIN4Q96Q06 1357 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 GSC2O15499 205 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 RABGGTBP53611 331 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 C21orf59P57076 290 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 AP5B1Q2VPB7 878 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 ZNF549Q6P9A3 640 aa16.08■□□□□ 0.16
PTPN11-201ENST00000351677 QKIQ96PU8 341 aaKnown RBP eCLIP16.08■□□□□ 0.166e-6■■■■□ 20.5
PTPN11-201ENST00000351677 RPTORQ8N122 1335 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 ZNF541Q9H0D2 1346 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 LRATO95237 230 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 TUSC3Q13454 348 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 CCDC157Q569K6 752 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 ADGRD1Q6QNK2 874 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 USP7Q93009 1102 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 RXRGP48443 463 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 SLC7A2P52569 658 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 FOLH1Q04609 750 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 PTP4A2Q12974 167 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 USP39Q53GS9 565 aaKnown RBP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 GATAD2AQ86YP4 633 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 ZC3H7AQ8IWR0 971 aaKnown RBP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 FITM2Q8N6M3 262 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 FAM13CQ8NE31 585 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 RNFT2Q96EX2 444 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 OSBPL10Q9BXB5 764 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 XPNPEP1Q9NQW7 623 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 STMN3Q9NZ72 180 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 ATP6V1HQ9UI12 483 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 ATP6V1C1P21283 382 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 GSTT1P30711 240 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 TSNQ15631 228 aaKnown RBP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 DLG2Q15700 870 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 RSBN1Q5VWQ0 802 aaPredicted RBP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 C12orf50Q8NA57 414 aaPredicted RBP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 HJURPQ8NCD3 748 aaPredicted RBP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 FTHL17Q9BXU8 183 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 GMIPQ9P107 970 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 NPEPPSL1A6NEC2 478 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 SOWAHBA6NEL2 793 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 OTCP00480 354 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 NELFEP18615 380 aaKnown RBP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 TAF10Q12962 218 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 KCTD21Q4G0X4 260 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 VWA5B1Q5TIE3 1220 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 ADAMTSL2Q86TH1 951 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 NXNL1Q96CM4 212 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 ASAH2Q9NR71 780 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 SNX10Q9Y5X0 201 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 IFT172Q9UG01 1749 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 EPORP19235 508 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 INHBEP58166 350 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 XKR6Q5GH73 641 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 RAET1GQ6H3X3 334 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 B3GNT6Q6ZMB0 384 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 ARHGAP36Q6ZRI8 547 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 LDB1Q86U70 411 aaPredicted RBP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.07■□□□□ 0.16
PTPN11-201ENST00000351677 CLIC5Q9NZA1 410 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 GRHL1Q9NZI5 618 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 FBXO10Q9UK96 956 aa16.07■□□□□ 0.16
PTPN11-201ENST00000351677 MED1Q15648 1581 aaPredicted RBP16.06■□□□□ 0.16
PTPN11-201ENST00000351677 ALOX12P18054 663 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 TALDO1P37837 337 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 ATP6V0D1P61421 351 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 PRKG2Q13237 762 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 LPCAT4Q643R3 524 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 ATAD1Q8NBU5 361 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 VMP1Q96GC9 406 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 HDHD2Q9H0R4 259 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 SDCBP2Q9H190 292 aa16.06■□□□□ 0.16
PTPN11-201ENST00000351677 RHBGQ9H310 441 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms