RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 CNPY4Q8N129 248 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 PHTF2Q8N3S3 785 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 SMRP1Q8NCR6 262 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 MDGA1Q8NFP4 955 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 OR13J1Q8NGT2 312 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 MDM1Q8TC05 714 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 DENND1AQ8TEH3 1009 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 MYLIPQ8WY64 445 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 FGF14Q92915 247 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 AGAP2Q99490 1192 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 CPNE1Q99829 537 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 RPP25Q9BUL9 199 aaKnown RBP11.05□□□□□ -0.64
ECM1-201ENST00000346569 ADGRE3Q9BY15 652 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 TNKS2Q9H2K2 1166 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 TRABDQ9H4I3 376 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 CNOT10Q9H9A5 744 aaKnown RBP11.05□□□□□ -0.64
ECM1-201ENST00000346569 SSU72Q9NP77 194 aaKnown RBP11.05□□□□□ -0.64
ECM1-201ENST00000346569 PPANQ9NQ55 473 aaKnown RBP11.05□□□□□ -0.64
ECM1-201ENST00000346569 C20orf96Q9NUD7 363 aaPredicted RBP11.05□□□□□ -0.64
ECM1-201ENST00000346569 ELOVL2Q9NXB9 296 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 PSD3Q9NYI0 1048 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 ZFATQ9P243 1243 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 SLC25A13Q9UJS0 675 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 PPIL1Q9Y3C6 166 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 KCTD3Q9Y597 815 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 SPO11Q9Y5K1 396 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 PSAT1Q9Y617 370 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 IKBKGQ9Y6K9 419 aa11.05□□□□□ -0.64
ECM1-201ENST00000346569 A6NNZ2 444 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 TRIM49D1C9J1S8 452 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 TIMM44O43615 452 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 TYROBPO43914 113 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 SOCS5O75159 536 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 ECI2O75521 394 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 RFPL1O75677 317 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 KRT37O76014 449 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 KRT38O76015 456 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 VAPBO95292 243 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 PGLSO95336 258 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 POP4O95707 220 aaKnown RBP11.04□□□□□ -0.64
ECM1-201ENST00000346569 IGSF6O95976 241 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 ASLP04424 464 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 PRKCGP05129 697 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 SRPRAP08240 638 aaKnown RBP11.04□□□□□ -0.64
ECM1-201ENST00000346569 DLDP09622 509 aaKnown RBP11.04□□□□□ -0.64
ECM1-201ENST00000346569 BRAFP15056 766 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 CNTFP26441 200 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 GKP32189 559 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 GBP2P32456 591 aaPredicted RBP11.04□□□□□ -0.64
ECM1-201ENST00000346569 MDH1P40925 334 aaKnown RBP11.04□□□□□ -0.64
ECM1-201ENST00000346569 ARSDP51689 593 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 RPL26P61254 145 aaKnown RBP11.04□□□□□ -0.64
ECM1-201ENST00000346569 BCL2L1Q07817 233 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 PTPRNQ16849 979 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 TUBB8Q3ZCM7 444 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 C22orf39Q6P5X5 142 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 TTC30BQ8N4P2 665 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 STYXQ8WUJ0 223 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 CENPTQ96BT3 561 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 RMDN1Q96DB5 314 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 MTBPQ96DY7 904 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 CHFRQ96EP1 664 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 SERAC1Q96JX3 654 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 SMIM14Q96QK8 99 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 MAGEE1Q9HCI5 957 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.04□□□□□ -0.64
ECM1-201ENST00000346569 SLC17A6Q9P2U8 582 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 DEC1Q9P2X7 70 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 EPS15L1Q9UBC2 864 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 RPL26L1Q9UNX3 145 aaKnown RBP11.04□□□□□ -0.64
ECM1-201ENST00000346569 PCDHB9Q9Y5E1 797 aa11.04□□□□□ -0.64
ECM1-201ENST00000346569 CCDC78A2IDD5 438 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 PRRT4C9JH25 899 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 GOLGA8TH3BQL2 631 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 ARNTLO00327 626 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 AURKAO14965 403 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 PRPF4O43172 522 aaKnown RBP eCLIP11.03□□□□□ -0.64
ECM1-201ENST00000346569 SLC7A4O43246 635 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 SHOX2O60902 331 aaPredicted RBP11.03□□□□□ -0.64
ECM1-201ENST00000346569 AHSGP02765 367 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 MT-ND3P03897 115 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 ATP5BP06576 529 aaKnown RBP11.03□□□□□ -0.64
ECM1-201ENST00000346569 PIRTP0C851 137 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 PAMP19021 973 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 CA4P22748 312 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 GABRB3P28472 473 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 GJA4P35212 333 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 GP5P40197 560 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 OPRD1P41143 372 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 CSE1LP55060 971 aaKnown RBP11.03□□□□□ -0.64
ECM1-201ENST00000346569 SEPT6Q14141 434 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 TAF1AQ15573 450 aaPredicted RBP11.03□□□□□ -0.64
ECM1-201ENST00000346569 ARMC12Q5T9G4 340 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 NEPROQ6NW34 567 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 DPY19L3Q6ZPD9 716 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 RASSF3Q86WH2 238 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 BANPQ8N9N5 519 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 KDM1BQ8NB78 822 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 LPCAT1Q8NF37 534 aa11.03□□□□□ -0.64
ECM1-201ENST00000346569 OR2A12Q8NGT7 310 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms