RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 GLRX5Q86SX6 157 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 SPATS2Q86XZ4 545 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 GATAD2AQ86YP4 633 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 CCDC50Q8IVM0 306 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 CCDC13Q8IYE1 715 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 ATL2Q8NHH9 583 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 FATE1Q969F0 183 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 HDAC11Q96DB2 347 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 ECHDC3Q96DC8 303 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 BRD8Q9H0E9 1235 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 RBM22Q9NW64 420 aaKnown RBP eCLIP15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 DNAJC28Q9NX36 388 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 GGT7Q9UJ14 662 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 PHTF1Q9UMS5 762 aa15.88■□□□□ 0.13
TSPAN4-201ENST00000346501 MUSKO15146 869 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 ZRANB2O95218 330 aaKnown RBP eCLIP15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 C6P13671 934 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 HTR1BP28222 390 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 MMP12P39900 470 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 LIG3P49916 1009 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 MAXP61244 160 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 GBE1Q04446 702 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 PDE1CQ14123 709 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 ARHGEF7Q14155 803 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 FGL2Q14314 439 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 C11orf63Q6NUN7 778 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 USP45Q70EL2 814 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 PARGQ86W56 976 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 TEX26Q8N6G2 289 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 PQLC3Q8N755 202 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 SPC24Q8NBT2 197 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 SAP25Q8TEE9 199 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 BTN2A2Q8WVV5 523 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 RBM41Q96IZ5 413 aaKnown RBP15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 BMFQ96LC9 184 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 SEMA3CQ99985 751 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 NOD2Q9HC29 1040 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 DTLQ9NZJ0 730 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 HYOU1Q9Y4L1 999 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 PCDHGC4Q9Y5F7 938 aa15.87■□□□□ 0.13
TSPAN4-201ENST00000346501 SPTY2D1-AS1A0A0U1RR47 76 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 POM121BA6NF01 834 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 GOLGA8CPA6NN73 597 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 RAD51BO15315 384 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 CBFA2T3O75081 653 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 MAP3K6O95382 1288 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 PEX11BO96011 259 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 FTH1P19P0C7X4 201 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 CDK4P11802 303 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 FECHP22830 423 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 NR2C2P49116 596 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 GSDMDP57764 484 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 DYNLT1P63172 113 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 SHC2P98077 582 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 AP1B1Q10567 949 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 KIF5AQ12840 1032 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 SLC9A4Q6AI14 798 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 RCOR2Q8IZ40 523 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 EID2Q8N6I1 236 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 MAML1Q92585 1016 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 CENPTQ96BT3 561 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 KLF6Q99612 283 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 FERMT1Q9BQL6 677 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 DNPEPQ9ULA0 475 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 BTBD3Q9Y2F9 522 aa15.86■□□□□ 0.13
TSPAN4-201ENST00000346501 TMEM131Q92545 1883 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 TRAFD1O14545 582 aaPredicted RBP15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 SPINT1O43278 529 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 HTRA2O43464 458 aaPredicted RBP15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 NRDCO43847 1150 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 ITIH2P19823 946 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 CR2P20023 1033 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 TNNT3P45378 269 aaPredicted RBP15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 PEX5P50542 639 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 BLKP51451 505 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 VAV2P52735 878 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 PFN3P60673 137 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 BNIP3Q12983 259 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 ACOX1Q15067 660 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 TFDP3Q5H9I0 405 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 CCDC181Q5TID7 509 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 KAZNQ674X7 775 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 DPPA4Q7L190 304 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 PGBD5Q8N414 524 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 TPCN2Q8NHX9 752 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 KIAA1524Q8TCG1 905 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 SPOCK2Q92563 424 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 CNDP2Q96KP4 475 aaKnown RBP15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 RAI2Q9Y5P3 530 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 NCOR2Q9Y618 2525 aa15.85■□□□□ 0.13
TSPAN4-201ENST00000346501 SHROOM3Q8TF72 1996 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 DOCK9Q9BZ29 2069 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 BTNL10A8MVZ5 291 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 PDE2AO00408 941 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 ENC1O14682 589 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 MTSS1O43312 755 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 SDC3O75056 442 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 PGLSO95336 258 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 JCHAINP01591 159 aa15.84■□□□□ 0.13
TSPAN4-201ENST00000346501 PRKCGP05129 697 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms