RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RASIP1Q5U651 963 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 TRAF7Q6Q0C0 670 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 PIM3Q86V86 326 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 NPAS2Q99743 824 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 CRISPLD1Q9H336 500 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 PLXNA3P51805 1871 aa21.54■■□□□ 1.04
CCDC38-201ENST00000344280 IGLV3-10A0A075B6K4 115 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 MAGEA13PA6NCF6 341 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 MROH6A6NGR9 719 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 RNASEH1O60930 286 aaKnown RBP21.53■■□□□ 1.04
CCDC38-201ENST00000344280 ATXN1LP0C7T5 689 aaKnown RBP21.53■■□□□ 1.04
CCDC38-201ENST00000344280 SLC2A3P11169 496 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 ACVRL1P37023 503 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 C1QTNF8P60827 252 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 MS4A2Q01362 244 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 CEACAM7Q14002 265 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 TRIP10Q15642 601 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 ZNF423Q2M1K9 1284 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 PIGGQ5H8A4 983 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 C16orf89Q6UX73 402 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 SLC24A5Q71RS6 500 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 FUBP3Q96I24 572 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC38-201ENST00000344280 UBXN10Q96LJ8 280 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 RANBP9Q96S59 729 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 VPS45Q9NRW7 570 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 TCAF2A6NFQ2 919 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 MUSKO15146 869 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 LYNP07948 512 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 LTA4HP09960 611 aaKnown RBP21.53■■□□□ 1.04
CCDC38-201ENST00000344280 ATXN3P54252 364 aaPredicted RBP21.53■■□□□ 1.04
CCDC38-201ENST00000344280 NFE2Q16621 373 aaPredicted RBP21.53■■□□□ 1.04
CCDC38-201ENST00000344280 TEX26Q8N6G2 289 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 IFT43Q96FT9 208 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 TUBGCP5Q96RT8 1024 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 VCXQ9H320 206 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.53■■□□□ 1.04
CCDC38-201ENST00000344280 FNIP2Q9P278 1114 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 CRYL1Q9Y2S2 319 aa21.53■■□□□ 1.04
CCDC38-201ENST00000344280 TMEM88BA6NKF7 163 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 CA12O43570 354 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 IPO13O94829 963 aaKnown RBP21.52■■□□□ 1.04
CCDC38-201ENST00000344280 S1PR4O95977 384 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 TSPAN8P19075 237 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 PEX19P40855 299 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 CLCN5P51795 746 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 TAF10Q12962 218 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 PPP1R3AQ16821 1122 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 CTXN3Q4LDR2 81 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 GPR158Q5T848 1215 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 AGAP9Q5VTM2 703 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 FOXB2Q5VYV0 432 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 BNC2Q6ZN30 1099 aaPredicted RBP21.52■■□□□ 1.04
CCDC38-201ENST00000344280 GK5Q6ZS86 529 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 HMGCLL1Q8TB92 370 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 CALML6Q8TD86 181 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 FBXO32Q969P5 355 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 BTN2A3PQ96KV6 586 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 KLHL4Q9C0H6 718 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 PRPF19Q9UMS4 504 aaKnown RBP21.52■■□□□ 1.04
CCDC38-201ENST00000344280 VWA7Q9Y334 891 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 PCDHB5Q9Y5E4 795 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 FRMPD3Q5JV73 1810 aa21.52■■□□□ 1.04
CCDC38-201ENST00000344280 LDB2O43679 373 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 TADA2AO75478 443 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 CCNHP51946 323 aaPredicted RBP21.52■■□□□ 1.03
CCDC38-201ENST00000344280 GSTA3Q16772 222 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 C10orf120Q5SQS8 335 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 SPPL2BQ8TCT7 592 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 RPRD1AQ96P16 312 aaPredicted RBP21.52■■□□□ 1.03
CCDC38-201ENST00000344280 WDR41Q9HAD4 459 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 SLC24A3Q9HC58 644 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 MARCH2Q9P0N8 246 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 HCSTQ9UBK5 93 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 ACTL7AQ9Y615 435 aa21.52■■□□□ 1.03
CCDC38-201ENST00000344280 SLC22A2O15244 555 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 EOMESO95936 686 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 YWHAQP27348 245 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 POLD3Q15054 466 aaPredicted RBP21.51■■□□□ 1.03
CCDC38-201ENST00000344280 SLC14A2Q15849 920 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 CUZD1Q86UP6 607 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 PELI3Q8N2H9 469 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 SNX31Q8N9S9 440 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 TADA1Q96BN2 335 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 TBATAQ96M53 351 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 NR1H4Q96RI1 486 aaPredicted RBP21.51■■□□□ 1.03
CCDC38-201ENST00000344280 GPR62Q9BZJ7 368 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 ALG9Q9H6U8 611 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 IL37Q9NZH6 218 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 ARL5AQ9Y689 179 aa21.51■■□□□ 1.03
CCDC38-201ENST00000344280 SLC12A8A0AV02 714 aa21.5■■□□□ 1.03
CCDC38-201ENST00000344280 TMEM189-UBE2V1I3L0A0 370 aa21.5■■□□□ 1.03
CCDC38-201ENST00000344280 UBFD1O14562 309 aaKnown RBP21.5■■□□□ 1.03
CCDC38-201ENST00000344280 PAPSS2O95340 614 aaPredicted RBP21.5■■□□□ 1.03
CCDC38-201ENST00000344280 PIRTP0C851 137 aa21.5■■□□□ 1.03
CCDC38-201ENST00000344280 KPNA2P52292 529 aaKnown RBP21.5■■□□□ 1.03
CCDC38-201ENST00000344280 MRPS22P82650 360 aaKnown RBP21.5■■□□□ 1.03
CCDC38-201ENST00000344280 FAM171A1Q5VUB5 890 aa21.5■■□□□ 1.03
CCDC38-201ENST00000344280 RSPO2Q6UXX9 243 aaPredicted RBP21.5■■□□□ 1.03
CCDC38-201ENST00000344280 PGAM4Q8N0Y7 254 aa21.5■■□□□ 1.03
CCDC38-201ENST00000344280 ATP6V0D2Q8N8Y2 350 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms