RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 PPP2CBP62714 309 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 PPP2CAP67775 309 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 C2orf54Q08AI8 447 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 MPP3Q13368 585 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 PPP1R7Q15435 360 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 LRRC73Q5JTD7 316 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 KIAA0895LQ68EN5 471 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 BRAT1Q6PJG6 821 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 PRPF39Q86UA1 669 aaKnown RBP22.11■■□□□ 1.13
RBM38-201ENST00000342690 SPATA22Q8NHS9 363 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 LRRC45Q96CN5 670 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 KDM4CQ9H3R0 1056 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 VPS45Q9NRW7 570 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 AAR2Q9Y312 384 aaKnown RBP22.11■■□□□ 1.13
RBM38-201ENST00000342690 FADS3Q9Y5Q0 445 aa22.11■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3DA0A087WVF3 549 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3IA0A087WXS9 549 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3EA0A087X179 549 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3KA0A087X1G2 549 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3FA6NER0 549 aaPredicted RBP22.1■■□□□ 1.13
RBM38-201ENST00000342690 MEI4A8MW99 385 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3LB9A6J9 549 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 FSBPO95073 299 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 EPN2O95208 641 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 KRT14P02533 472 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3HP0C7X1 549 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 XPAP23025 273 aaPredicted RBP22.1■■□□□ 1.13
RBM38-201ENST00000342690 FDFT1P37268 417 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 PCSK7Q16549 785 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 ARMC12Q5T9G4 340 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 LYSMD4Q5XG99 296 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3GQ6DHY5 549 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3CQ6IPX1 549 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TTC7BQ86TV6 843 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 TBC1D3Q8IZP1 549 aaPredicted RBP22.1■■□□□ 1.13
RBM38-201ENST00000342690 FOXJ1Q92949 421 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 SLCO2A1Q92959 643 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 RAB7BQ96AH8 199 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 IFT43Q96FT9 208 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 LOXL4Q96JB6 756 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 KRT12Q99456 494 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 PREBQ9HCU5 417 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 UBP1Q9NZI7 540 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 GGT7Q9UJ14 662 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 ITM2BQ9Y287 266 aa22.1■■□□□ 1.13
RBM38-201ENST00000342690 UPK3BL1B0FP48 263 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 UPK3BL2E5RIL1 263 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 AP1G1O43747 822 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 PMPCBO75439 489 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 MT-CYBP00156 380 aaPredicted RBP22.09■■□□□ 1.13
RBM38-201ENST00000342690 CPP00450 1065 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 IGHV4-34P06331 123 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 ZSCAN5DPP0CG00 497 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 ITIH2P19823 946 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 RPL22P35268 128 aaKnown RBP22.09■■□□□ 1.13
RBM38-201ENST00000342690 POLR2LP62875 67 aaKnown RBP22.09■■□□□ 1.13
RBM38-201ENST00000342690 DR1Q01658 176 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 DHX34Q14147 1143 aaKnown RBP22.09■■□□□ 1.13
RBM38-201ENST00000342690 UGP2Q16851 508 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 SYDE1Q6ZW31 735 aaPredicted RBP22.09■■□□□ 1.13
RBM38-201ENST00000342690 ASCL5Q7RTU5 278 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 PRUNE1Q86TP1 453 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 CEP112Q8N8E3 955 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 GLIS1Q8NBF1 620 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 CCHCR1Q8TD31 782 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 TADA1Q96BN2 335 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 BIRC7Q96CA5 298 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 FSD1LQ9BXM9 530 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 TDRD1Q9BXT4 1180 aaKnown RBP22.09■■□□□ 1.13
RBM38-201ENST00000342690 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.09■■□□□ 1.13
RBM38-201ENST00000342690 PCDHB9Q9Y5E1 797 aa22.09■■□□□ 1.13
RBM38-201ENST00000342690 ATXN2Q99700 1313 aaKnown RBP22.08■■□□□ 1.13
RBM38-201ENST00000342690 VPS13AQ96RL7 3174 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 AREL1O15033 823 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 PSMD3O43242 534 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 PGLSO95336 258 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 METTL18O95568 372 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 PRKCGP05129 697 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 ITPKAP23677 461 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 NFKBIAP25963 317 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 EPHB1P54762 984 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 TRIP13Q15645 432 aaPredicted RBP22.08■■□□□ 1.13
RBM38-201ENST00000342690 FAXCQ5TGI0 409 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 CYP2U1Q7Z449 544 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 TAB3Q8N5C8 712 aaPredicted RBP22.08■■□□□ 1.13
RBM38-201ENST00000342690 SNX19Q92543 992 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 OXNAD1Q96HP4 312 aaPredicted RBP22.08■■□□□ 1.13
RBM38-201ENST00000342690 ADGRE3Q9BY15 652 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 PCDH12Q9NPG4 1184 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 RAB6BQ9NRW1 208 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 GMEB2Q9UKD1 530 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 CHKBQ9Y259 395 aa22.08■■□□□ 1.13
RBM38-201ENST00000342690 CTAGE15A4D2H0 777 aa22.07■■□□□ 1.12
RBM38-201ENST00000342690 E7EVH7 732 aa22.07■■□□□ 1.12
RBM38-201ENST00000342690 FZD6O60353 706 aa22.07■■□□□ 1.12
RBM38-201ENST00000342690 RNGTTO60942 597 aaKnown RBP22.07■■□□□ 1.12
RBM38-201ENST00000342690 PDHA1P08559 390 aa22.07■■□□□ 1.12
RBM38-201ENST00000342690 CTAGE8P0CG41 777 aa22.07■■□□□ 1.12
RBM38-201ENST00000342690 MAOBP27338 520 aa22.07■■□□□ 1.12
RBM38-201ENST00000342690 LMAN1P49257 510 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms