RNA–Protein interactions for RNA: ENST00000342075.8

PMS1-201, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 3,012 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-201ENST00000342075 ZNF557Q8N988 423 aaPredicted RBP13.97□□□□□ -0.17
PMS1-201ENST00000342075 PIH1D2Q8WWB5 315 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 EID2BQ96D98 161 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 AGAP2Q99490 1192 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 TSPYL1Q9H0U9 437 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 SLC6A17Q9H1V8 727 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 PSAT1Q9Y617 370 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 DOCK9Q9BZ29 2069 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 BDP1A6H8Y1 2624 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 ANKRD66B4E2M5 251 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 NDC80O14777 642 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 PGLSO95336 258 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 APODP05090 189 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 EPHX1P07099 455 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 ARNTP27540 789 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 ST8SIA6P61647 398 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 CNGA3Q16281 694 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 C9orf64Q5T6V5 341 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 TSPAN33Q86UF1 283 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 CHPFQ8IZ52 775 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 CYP4X1Q8N118 509 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 ZNF513Q8N8E2 541 aaPredicted RBP13.97□□□□□ -0.17
PMS1-201ENST00000342075 IL22Q9GZX6 179 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 TMEM245Q9H330 911 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 ARNT2Q9HBZ2 717 aa13.97□□□□□ -0.17
PMS1-201ENST00000342075 LDB2O43679 373 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 NUDT17P0C025 328 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 PGAM1P18669 254 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 NNMTP40261 264 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 AP1S1P61966 158 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 KRT71Q3SY84 523 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 ANKRD20A4Q4UJ75 823 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 KIAA1211LQ6NV74 962 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 ATP13A3Q9H7F0 1226 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 TCAF1Q9Y4C2 921 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 WDR87Q6ZQQ6 2873 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 EXOC1LA0A1B0GW35 172 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 PSMD3O43242 534 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 KIR2DL1P43626 348 aaPredicted RBP13.96□□□□□ -0.17
PMS1-201ENST00000342075 EPHB1P54762 984 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 TTMPQ5BVD1 217 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 ARMC12Q5T9G4 340 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 OR13J1Q8NGT2 312 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 ISG20Q96AZ6 181 aaKnown RBP13.96□□□□□ -0.17
PMS1-201ENST00000342075 DNAJC1Q96KC8 554 aaKnown RBP13.96□□□□□ -0.17
PMS1-201ENST00000342075 FRMD8Q9BZ67 464 aaPredicted RBP13.96□□□□□ -0.17
PMS1-201ENST00000342075 CEP44Q9C0F1 390 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 BCCIPQ9P287 314 aaKnown RBP eCLIP13.96□□□□□ -0.17
PMS1-201ENST00000342075 GGT7Q9UJ14 662 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 CA14Q9ULX7 337 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 SOX13Q9UN79 622 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 ITM2BQ9Y287 266 aa13.96□□□□□ -0.17
PMS1-201ENST00000342075 SRPRAP08240 638 aaKnown RBP13.96□□□□□ -0.18
PMS1-201ENST00000342075 PGGT1BP53609 377 aa13.96□□□□□ -0.18
PMS1-201ENST00000342075 PKN3Q6P5Z2 889 aa13.96□□□□□ -0.18
PMS1-201ENST00000342075 TMEM135Q86UB9 458 aa13.96□□□□□ -0.18
PMS1-201ENST00000342075 CTAGE3PQ8IX95 158 aa13.96□□□□□ -0.18
PMS1-201ENST00000342075 PLCD3Q8N3E9 789 aa13.96□□□□□ -0.18
PMS1-201ENST00000342075 GSDMBQ8TAX9 411 aa13.96□□□□□ -0.18
PMS1-201ENST00000342075 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.96□□□□□ -0.18
PMS1-201ENST00000342075 NDRG2Q9UN36 371 aaKnown RBP13.96□□□□□ -0.18
PMS1-201ENST00000342075 A0A087WUV0 522 aaPredicted RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 NPIPB15A6NHN6 443 aaPredicted RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 HTRA2O43464 458 aaPredicted RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 VAPBO95292 243 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 GSRP00390 522 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 FGF1P05230 155 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 HLA-DPA1P20036 260 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 RECQLP46063 649 aaPredicted RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 NPY2RP49146 381 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 HNRNPA1L2Q32P51 320 aaKnown RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 HSP90AA5PQ58FG0 334 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 PCID2Q5JVF3 399 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 RFLNAQ6ZTI6 216 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 TPRG1Q6ZUI0 275 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 LYSMD3Q7Z3D4 306 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 LDB1Q86U70 411 aaPredicted RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 PPM1NQ8N819 430 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 NAT14Q8WUY8 206 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 ATXN7L3BQ96GX2 97 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 TTC25Q96NG3 672 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 KIFC1Q9BW19 673 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 PHACTR1Q9C0D0 580 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 SUV39H2Q9H5I1 410 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 THAP10Q9P2Z0 257 aaPredicted RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 STON1Q9Y6Q2 735 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 NCOR1O75376 2440 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 LOC730098B7Z3J9 87 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 POP4O95707 220 aaKnown RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 ASLP04424 464 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 CHRM1P11229 460 aaPredicted RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 SERPINA4P29622 427 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 HNF1BP35680 557 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 EIF4HQ15056 248 aaKnown RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 GLT6D1Q7Z4J2 308 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 MMAAQ8IVH4 418 aaKnown RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 PPHLN1Q8NEY8 458 aaKnown RBP13.95□□□□□ -0.18
PMS1-201ENST00000342075 LRRC39Q96DD0 335 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 RUFY1Q96T51 708 aa13.95□□□□□ -0.18
PMS1-201ENST00000342075 HEPHQ9BQS7 1158 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms