RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 PGK1P00558 417 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TPBGLP0DKB5 382 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 RPL17P18621 184 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 MSR1P21757 451 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TGM2P21980 687 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PTPN4P29074 926 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 DYNLL1P63167 89 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 PTPN11Q06124 597 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 FAM133BQ5BKY9 247 aaKnown RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 IFNEQ86WN2 208 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM17Q86X19 198 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 LIX1Q8N485 282 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 GOT1L1Q8NHS2 421 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 ACTRT1Q8TDG2 376 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 C19orf43Q9BQ61 176 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 SFXN1Q9H9B4 322 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM161AQ9NX61 479 aa3.31□□□□□ -1.88
CSMD3-202ENST00000339701 IFT80Q9P2H3 777 aaPredicted RBP3.31□□□□□ -1.88
CSMD3-202ENST00000339701 UBA6A0AVT1 1052 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 FADS2O95864 444 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GSTT2BP0CG30 244 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 MYBP10242 640 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 AKT2P31751 481 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 DDIT3P35638 169 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PRKCIP41743 596 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CENPAP49450 140 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TAS2R50P59544 299 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PSMC6P62333 389 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RBP5P82980 135 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CDC16Q13042 620 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 FRG1Q14331 258 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TRAM1Q15629 374 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PCK2Q16822 640 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PDCD4Q53EL6 469 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 LRRC38Q5VT99 294 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PLET1Q6UQ28 207 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PGAP1Q75T13 922 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 C14orf80Q86SX3 495 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RASGEF1AQ8N9B8 481 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TC2NQ8N9U0 490 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RNF149Q8NC42 400 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GLB1L3Q8NCI6 653 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 OR51D1Q8NGF3 324 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SETD6Q8TBK2 473 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TMC2Q8TDI7 906 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PXYLP1Q8TE99 480 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 DCAKDQ8WVC6 231 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ASB13Q8WXK3 278 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CD101Q93033 1021 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PLGRKTQ9HBL7 147 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 KCNK4Q9NYG8 393 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ARIH1Q9Y4X5 557 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PLIN4Q96Q06 1357 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 A0A1W2PPC1 479 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TULP3O75386 442 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 COL6A2P12110 1019 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ATF4P18848 351 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PROZP22891 400 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SSTP61278 116 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SEC23BQ15437 767 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 Q4G0T1 1027 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EMC10Q5UCC4 262 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ANKRD26P1Q6NSI1 321 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GALNT12Q8IXK2 581 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 HORMAD2Q8N7B1 307 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 LINC00301Q8NCQ3 95 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RIT2Q99578 217 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ROGDIQ9GZN7 287 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 UNC93B1Q9H1C4 597 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 FAM207AQ9NSI2 230 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ANKEF1Q9NU02 776 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ABHD10Q9NUJ1 306 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ADAM28Q9UKQ2 775 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EFCAB10A6NFE3 127 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 LGR5O75473 907 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SERPINA3P01011 423 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PFKFB1P16118 471 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PTPN2P17706 415 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TCN1P20061 433 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PDHA2P29803 388 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SLC1A2P43004 574 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ALDH9A1P49189 494 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CYP2J2P51589 502 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF200P98182 395 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ATP2C1P98194 919 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 BAATQ14032 418 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 KCNJ8Q15842 424 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 B3GNT6Q6ZMB0 384 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CIR1Q86X95 450 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CCDC60Q8IWA6 550 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SCUBE1Q8IWY4 988 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 LRRC17Q8N6Y2 441 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ATG16L2Q8NAA4 619 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CCDC107Q8WV48 283 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 FUT8Q9BYC5 575 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NPHS2Q9NP85 383 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 HPS4Q9NQG7 708 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ARL8BQ9NVJ2 186 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TAB2Q9NYJ8 693 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SLC27A6Q9Y2P4 619 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms