RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 GLB1P16278 677 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 SDC4P31431 198 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 ETV5P41161 510 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 ZFP36L1Q07352 338 aaKnown RBP11.59□□□□□ -0.55
CSMD2-202ENST00000338325 MTM1Q13496 603 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 INPP5AQ14642 412 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 AGERQ15109 404 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 TBR1Q16650 682 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 CCDC14Q49A88 953 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 INO80DQ53TQ3 878 aaPredicted RBP11.59□□□□□ -0.55
CSMD2-202ENST00000338325 CERCAMQ5T4B2 595 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 NYAP1Q6ZVC0 841 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 STRADAQ7RTN6 431 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 SPRED1Q7Z699 444 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 NETO2Q8NC67 525 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 HCAR2Q8TDS4 363 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 RXFP2Q8WXD0 754 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 PDXPQ96GD0 296 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 CMKLR1Q99788 373 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 MAGEB5Q9BZ81 275 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 NDST4Q9H3R1 872 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 FOXJ2Q9P0K8 574 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 PCDHB11Q9Y5F2 797 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 DGKBQ9Y6T7 804 aa11.59□□□□□ -0.55
CSMD2-202ENST00000338325 A0A1W2PQC6 194 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 AGRPO00253 132 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 INSIG1O15503 277 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 PPFIA2O75334 1257 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 PIGNO95427 931 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 PCCBP05166 539 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 CD82P27701 267 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 PTPN9P43378 593 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 MAPK10P53779 464 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.56
CSMD2-202ENST00000338325 GRM3Q14832 879 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 TPD52L1Q16890 204 aaPredicted RBP11.58□□□□□ -0.56
CSMD2-202ENST00000338325 VWA3BQ502W6 1294 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 KLHDC7AQ5VTJ3 777 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 KCTD16Q68DU8 428 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 ERAP2Q6P179 960 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 OGFOD3Q6PK18 319 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 ZNF574Q6ZN55 896 aaPredicted RBP11.58□□□□□ -0.56
CSMD2-202ENST00000338325 ZFAND4Q86XD8 727 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 DTX1Q86Y01 620 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 CCDC185Q8N715 623 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 RTL3Q8N8U3 475 aaKnown RBP11.58□□□□□ -0.56
CSMD2-202ENST00000338325 EPS8L1Q8TE68 723 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 USP7Q93009 1102 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 NTAN1Q96AB6 310 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 HMCESQ96FZ2 354 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 EXOC2Q96KP1 924 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 NAA15Q9BXJ9 866 aaKnown RBP11.58□□□□□ -0.56
CSMD2-202ENST00000338325 KLC2Q9H0B6 622 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 NOL6Q9H6R4 1146 aaKnown RBP11.58□□□□□ -0.56
CSMD2-202ENST00000338325 PCDH12Q9NPG4 1184 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 LHX3Q9UBR4 397 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 DAAM1Q9Y4D1 1078 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 RNF215Q9Y6U7 377 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 ARHGEF17Q96PE2 2063 aaPredicted RBP11.58□□□□□ -0.56
CSMD2-202ENST00000338325 SDK2Q58EX2 2172 aa11.58□□□□□ -0.56
CSMD2-202ENST00000338325 TLN1Q9Y490 2541 aaKnown RBP11.58□□□□□ -0.56
CSMD2-202ENST00000338325 C2CD4BA6NLJ0 364 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 C9orf172C9J069 976 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 GADD45BO75293 160 aaPredicted RBP11.57□□□□□ -0.56
CSMD2-202ENST00000338325 PRKCSHP14314 528 aaPredicted RBP11.57□□□□□ -0.56
CSMD2-202ENST00000338325 WT1P19544 449 aaPredicted RBP11.57□□□□□ -0.56
CSMD2-202ENST00000338325 MMP12P39900 470 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 LIG3P49916 1009 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 HDAC4P56524 1084 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 KIAA1024LP59773 190 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 UGP2Q16851 508 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 C14orf28Q4W4Y0 310 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 MIIPQ5JXC2 388 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 COLEC12Q5KU26 742 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 PHF19Q5T6S3 580 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 TAF8Q7Z7C8 310 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 ZNF677Q86XU0 584 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 DNAAF5Q86Y56 855 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 SLITRK4Q8IW52 837 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 FAM114A1Q8IWE2 563 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 FAM46DQ8NEK8 389 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 JOSD2Q8TAC2 188 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 GPT2Q8TD30 523 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 FAM172AQ8WUF8 416 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 HTR3CQ8WXA8 447 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 OR1E3Q8WZA6 343 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 FUCA2Q9BTY2 467 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 B3GNT4Q9C0J1 378 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 SUV39H2Q9H5I1 410 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 KIAA1468Q9P260 1216 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 LRIT1Q9P2V4 623 aa11.57□□□□□ -0.56
CSMD2-202ENST00000338325 B4DGG1 531 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 RASA4BC9J798 803 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 F8VZ95 297 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 CACNB4O00305 520 aaPredicted RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 RASA4O43374 803 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 NUDT21O43809 227 aaKnown RBP11.56□□□□□ -0.56
CSMD2-202ENST00000338325 UCHL3P15374 230 aa11.56□□□□□ -0.56
CSMD2-202ENST00000338325 MMP8P22894 467 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms