RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.28□□□□□ -1.08
HPS4-201ENST00000336873 SLC30A1Q9Y6M5 507 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 SCN1AP35498 2009 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 C15orf38-AP3S2A0A0A6YYH1 394 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ENPP3O14638 875 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 TPSB2P20231 275 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 PROZP22891 400 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 LSM3P62310 102 aaKnown RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 RPS24P62847 133 aaKnown RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 INCA1Q0VD86 236 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 NR6A1Q15406 480 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 TPSAB1Q15661 275 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 SLC5A9Q2M3M2 681 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 CCDC81Q6ZN84 652 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 DET1Q7L5Y6 550 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ARPINQ7Z6K5 226 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 CUZD1Q86UP6 607 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ARNTL2Q8WYA1 636 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 FIG4Q92562 907 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 LPGAT1Q92604 370 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 PTCD3Q96EY7 689 aaKnown RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 TEKT5Q96M29 485 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 BEGAINQ9BUH8 593 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 KATNAL1Q9BW62 490 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 CINPQ9BW66 212 aaPredicted RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 ZFYVE28Q9HCC9 887 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 TMLHEQ9NVH6 421 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 SIRPGQ9P1W8 387 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 HCSTQ9UBK5 93 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 GJD2Q9UKL4 321 aa8.28□□□□□ -1.08
HPS4-201ENST00000336873 ZNF646O15015 1829 aaPredicted RBP8.28□□□□□ -1.08
HPS4-201ENST00000336873 HACD1B0YJ81 288 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 MTSS1O43312 755 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 PQBP1O60828 265 aaKnown RBP8.27□□□□□ -1.08
HPS4-201ENST00000336873 ASGR1P07306 291 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 HNRNPCP07910 306 aaKnown RBP eCLIP8.27□□□□□ -1.08
HPS4-201ENST00000336873 MTHFD1P11586 935 aaKnown RBP8.27□□□□□ -1.08
HPS4-201ENST00000336873 IL10P22301 178 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 ACVRL1P37023 503 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 GATMP50440 423 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 RENBPP51606 427 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 STX5Q13190 355 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 ARHGEF7Q14155 803 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 SH3D19Q5HYK7 790 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 ARHGAP22Q7Z5H3 698 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 PQLC1Q8N2U9 271 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 CNTD1Q8N815 330 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 EZH1Q92800 747 aaPredicted RBP8.27□□□□□ -1.08
HPS4-201ENST00000336873 SDCCAG3Q96C92 435 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 THAP11Q96EK4 314 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 DCUN1D1Q96GG9 259 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 PPM1MQ96MI6 270 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 GLT1D1Q96MS3 346 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 HNRNPABQ99729 332 aaKnown RBP8.27□□□□□ -1.08
HPS4-201ENST00000336873 UBE2OQ9C0C9 1292 aaKnown RBP8.27□□□□□ -1.08
HPS4-201ENST00000336873 RHOJQ9H4E5 214 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 ATP13A1Q9HD20 1204 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 CNGB3Q9NQW8 809 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 TMEM30AQ9NV96 361 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 VPS28Q9UK41 221 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 VWA7Q9Y334 891 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 RAP2CQ9Y3L5 183 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 AP4S1Q9Y587 144 aa8.27□□□□□ -1.08
HPS4-201ENST00000336873 PRRG1O14668 218 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 PTGESO14684 152 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 CCNT2O60583 730 aaKnown RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 DAB1O75553 588 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 TGDSO95455 350 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 S100BP04271 92 aaPredicted RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 HAPLN1P10915 354 aaPredicted RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 PPARGP37231 505 aaPredicted RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 IL23RQ5VWK5 629 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 PKN3Q6P5Z2 889 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 ZNF534Q76KX8 674 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 GLT6D1Q7Z4J2 308 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 ZNF280BQ86YH2 543 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 OR4K2Q8NGD2 314 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 FBXO30Q8TB52 745 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 NSUN5Q96P11 429 aaKnown RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 MLPHQ9BV36 600 aaPredicted RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 ARHGAP39Q9C0H5 1083 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 FBXW11Q9UKB1 542 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 CROTQ9UKG9 612 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 PCDHB9Q9Y5E1 797 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 RP1L1Q8IWN7 2480 aaPredicted RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 A0A088AWK7 358 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 HEATR9A2RTY3 570 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 E9PAM4 449 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 FBXO21O94952 628 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 MPOP05164 745 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 GSNP06396 782 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 SLC2A3P11169 496 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 NPY2RP49146 381 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 PGFP49763 221 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 KCNQ1P51787 676 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 CRYBB1P53674 252 aaPredicted RBP8.27□□□□□ -1.09
HPS4-201ENST00000336873 KCNK10P57789 538 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 MAP2K5Q13163 448 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 ALFQ53S48 1182 aa8.27□□□□□ -1.09
HPS4-201ENST00000336873 KIAA0319Q5VV43 1072 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms