RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 AGTP01019 485 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 CTPS1P17812 591 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 SUOXP51687 545 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 TERF1P54274 439 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 TAS2R38P59533 333 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 RPL26P61254 145 aaKnown RBP14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 BASP1P80723 227 aaKnown RBP14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 PTK6Q13882 451 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 DHX34Q14147 1143 aaKnown RBP14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 SPARCL1Q14515 664 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 CCDC70Q6NSX1 233 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 ERAP2Q6P179 960 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 SLC36A4Q6YBV0 504 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 SYDE1Q6ZW31 735 aaPredicted RBP14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 SLC25A41Q8N5S1 370 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 PDCD7Q8N8D1 485 aaKnown RBP14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 PRSS33Q8NF86 280 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 GAB3Q8WWW8 586 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 RAB7BQ96AH8 199 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 LRRC45Q96CN5 670 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 RMDN1Q96DB5 314 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 TRIB3Q96RU7 358 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 WSB2Q9NYS7 404 aaPredicted RBP14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 RPL26L1Q9UNX3 145 aaKnown RBP14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 ITM2BQ9Y287 266 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 FADS3Q9Y5Q0 445 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 ZNF318Q5VUA4 2279 aa14.17□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3DA0A087WVF3 549 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3IA0A087WXS9 549 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3EA0A087X179 549 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3KA0A087X1G2 549 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 CTAGE15A4D2H0 777 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3FA6NER0 549 aaPredicted RBP14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 PRR23AA6NEV1 266 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 FAM47DPA6NHR8 397 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 LRRC72A6NJI9 287 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3LB9A6J9 549 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 H0Y858 1186 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 NEMP1O14524 444 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 RIOK3O14730 519 aaKnown RBP14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TTI1O43156 1089 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 SPINT1O43278 529 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 HRO43593 1189 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 AP1G1O43747 822 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 RPP40O75818 363 aaKnown RBP14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 NDST3O95803 873 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3HP0C7X1 549 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 CTAGE8P0CG41 777 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 BCKDHBP21953 392 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 CHRNA4P43681 627 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 GRIA4P48058 902 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 FAM193AP78312 1265 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 MRPS25P82663 173 aaKnown RBP14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 SEMG2Q02383 582 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 ELP6Q0PNE2 266 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 OLIG2Q13516 323 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 SEMA5AQ13591 1074 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 QPCTQ16769 361 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 SIRPB2Q5JXA9 342 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 KCTD11Q693B1 232 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3GQ6DHY5 549 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3CQ6IPX1 549 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 CTAGE6Q86UF2 777 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 JAMLQ86YT9 394 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 CTAGE4Q8IX94 777 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 KLHDC8BQ8IXV7 354 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBC1D3Q8IZP1 549 aaPredicted RBP14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 NDUFAF2Q8N183 169 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 CEP112Q8N8E3 955 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 ZBTB44Q8NCP5 570 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 OR2T34Q8NGX1 318 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 CCHCR1Q8TD31 782 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 SPOCK2Q92563 424 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 SMIM14Q96QK8 99 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TBL1YQ9BQ87 522 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 APOL2Q9BQE5 337 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 GPR174Q9BXC1 333 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 LRRC40Q9H9A6 602 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 ASIC3Q9UHC3 531 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 GGT7Q9UJ14 662 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 PCDHGA2Q9Y5H1 932 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 PLXND1Q9Y4D7 1925 aa14.16□□□□□ -0.14
APOBEC3B-202ENST00000335760 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 A8MX80 341 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 ANKRD66B4E2M5 251 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 AREL1O15033 823 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 USP12O75317 370 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 PCDH8O95206 1070 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 AP2A1O95782 977 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 EPOP01588 193 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 APRTP07741 180 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 ALPIP09923 528 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 ATXN1LP0C7T5 689 aaKnown RBP14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 NFKBIAP25963 317 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 CNR2P34972 360 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 ADRA1AP35348 466 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 HNF1BP35680 557 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 ADCY8P40145 1251 aa14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 RPL6Q02878 288 aaKnown RBP14.15□□□□□ -0.14
APOBEC3B-202ENST00000335760 PTPRRQ15256 657 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms