RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 MAMLD1Q13495 774 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 MSMPQ1L6U9 139 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 C15orf59Q2T9L4 293 aaPredicted RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 SETMARQ53H47 684 aaPredicted RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 INO80DQ53TQ3 878 aaPredicted RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 PRPF39Q86UA1 669 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 FAM124AQ86V42 546 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 NAXDQ8IW45 347 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 DRC7Q8IY82 874 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 UMODL1-AS1Q8N2C9 162 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 DEFB119Q8N690 84 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 RTL3Q8N8U3 475 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 ATP11CQ8NB49 1132 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ASB12Q8WXK4 309 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ARHGEF2Q92974 986 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 MCEEQ96PE7 176 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 HEPHQ9BQS7 1158 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 GTPBP2Q9BX10 602 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 OSBPL1AQ9BXW6 950 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 GAREM1Q9H706 876 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CATSPERBQ9H7T0 1116 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ATP13A1Q9HD20 1204 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 MRPL47Q9HD33 250 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 TM7SF3Q9NS93 570 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 MPP6Q9NZW5 540 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 SERGEFQ9UGK8 458 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 IL36AQ9UHA7 158 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 FZD10Q9ULW2 581 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 APOBEC2Q9Y235 224 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 ANKRD6Q9Y2G4 727 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 MFHAS1Q9Y4C4 1052 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 NEUROG3Q9Y4Z2 214 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CACNA1AO00555 2505 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CACNA1EQ15878 2313 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 A0A0D9SEW6 157 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 A0A1B0GTQ1 180 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 A0A1B0GVT2 93 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 TMEM191CA6NGB0 347 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 PRAMEF26H0Y7S4 382 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 TOR1BO14657 336 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CCP110O43303 1012 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 KDELR3O43731 214 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 SNAP91O60641 907 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 RAMP2O60895 175 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 SRGAP2O75044 1071 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ZNF821O75541 412 aaPredicted RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 RNF8O76064 485 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 FSBPO95073 299 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 DLGAP3O95886 979 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CD160O95971 181 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 SERPINC1P01008 464 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 TPM3P06753 285 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 MAOBP27338 520 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 HNRNPH3P31942 346 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 PCK1P35558 622 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 GRK6P43250 576 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 RXRGP48443 463 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 NEK3P51956 506 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 NDST2P52849 883 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 C21orf59P57076 290 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 SNRPD1P62314 119 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 ARF5P84085 180 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ZBED6P86452 979 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 KLHL30Q0D2K2 578 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 TRIM14Q14142 442 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 POLD3Q15054 466 aaPredicted RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 CDO1Q16878 200 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 HLA-BQ31612 363 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 UAP1L1Q3KQV9 507 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ACCSLQ4AC99 568 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 C2CD6Q53TS8 623 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CARD16Q5EG05 197 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 PIP5KL1Q5T9C9 394 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 KIAA1161Q6NSJ0 714 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 DCUN1D2Q6PH85 259 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 TMC6Q7Z403 805 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 TFAP2DQ7Z6R9 452 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 VPS36Q86VN1 386 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 DCP2Q8IU60 420 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 LZTR1Q8N653 840 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CCDC185Q8N715 623 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 NIPA2Q8N8Q9 360 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 DEFB124Q8NES8 71 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 OR14C36Q8NHC7 312 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 GANCQ8TET4 914 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ADAMTS14Q8WXS8 1223 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 SNX19Q92543 992 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ARHGEF26Q96DR7 871 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 SGSM3Q96HU1 749 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CPEB1Q9BZB8 566 aaKnown RBP6.44□□□□□ -1.38
SMG1-201ENST00000330588 MIR1-1HGQ9H1L0 117 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 MTG2Q9H4K7 406 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 HAUS4Q9H6D7 363 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CBX8Q9HC52 389 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 DYRK4Q9NR20 520 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ARHGAP20Q9P2F6 1191 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 PRDM4Q9UKN5 801 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 PCOLCE2Q9UKZ9 415 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 CAPN11Q9UMQ6 739 aa6.44□□□□□ -1.38
SMG1-201ENST00000330588 ZNF292O60281 2723 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms