RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 KALRNO60229 2985 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 LRRC53A6NM62 1247 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 TMCO5BA8MYB1 307 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 BUB1BO60566 1050 aaPredicted RBP17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 PALMO75781 387 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 RASGRP1O95267 797 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 C6P13671 934 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 TSHRP16473 764 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 TGM2P21980 687 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 MMP12P39900 470 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 MLLT3P42568 568 aaPredicted RBP17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 LIG3P49916 1009 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 RENBPP51606 427 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 HK3P52790 923 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 GABREP78334 506 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 TLE3Q04726 772 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 IL10RBQ08334 325 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 IRF4Q15306 451 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 ASIC2Q16515 512 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 GUSBP11Q6P575 273 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 RBM44Q6ZP01 1051 aaKnown RBP17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 CAMK1DQ8IU85 385 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 RBFAQ8N0V3 343 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 ARFGAP1Q8N6T3 406 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 SPOCK2Q92563 424 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 ECHDC3Q96DC8 303 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 BBC3Q96PG8 261 aaPredicted RBP17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 HAUS4Q9H6D7 363 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 THSD1Q9NS62 852 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 SCINQ9Y6U3 715 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 RP1P56715 2156 aa17.84■□□□□ 0.45
PTPMT1-201ENST00000326656 PIGNO95427 931 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 MPOP05164 745 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 MYBL1P10243 752 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 ERCC2P18074 760 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 MIPP30301 263 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 PCK1P35558 622 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 UCNP55089 124 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 MTM1Q13496 603 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 NFATC4Q14934 902 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 ANO6Q4KMQ2 910 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 GPR155Q7Z3F1 870 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 SPACA3Q8IXA5 215 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 SLC35F3Q8IY50 421 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 NETO2Q8NC67 525 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 TSEN2Q8NCE0 465 aaKnown RBP17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 OR6C4Q8NGE1 309 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 CRELD1Q96HD1 420 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 CELF6Q96J87 481 aaKnown RBP17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 ZNF599Q96NL3 588 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 APOOQ9BUR5 198 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 SNRNP25Q9BV90 132 aaKnown RBP17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 DPH1Q9BZG8 443 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 CLPBQ9H078 707 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 TCEAL2Q9H3H9 227 aaPredicted RBP17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 GPATCH2LQ9NWQ4 482 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 PCSK1NQ9UHG2 260 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 PNMA8BQ9ULN7 279 aaPredicted RBP17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 PADI4Q9UM07 663 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 PCDHGA8Q9Y5G5 932 aa17.83■□□□□ 0.44
PTPMT1-201ENST00000326656 SMG1Q96Q15 3661 aaKnown RBP17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 TEX51A0A1B0GUA7 166 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 A0A1W2PQ67 120 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 MUSKO15146 869 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 HOXC4P09017 264 aaPredicted RBP17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 CTSEP14091 401 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 AP1S1P61966 158 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 BCL2L1Q07817 233 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 KLHL30Q0D2K2 578 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 C1orf61Q13536 156 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 INPP5AQ14642 412 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 CA9Q16790 459 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 BOLA3Q53S33 107 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 FIGNQ5HY92 759 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 ZNF571Q7Z3V5 609 aaPredicted RBP17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 GKN2Q86XP6 184 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 ARHGAP12Q8IWW6 846 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 ARL10Q8N8L6 244 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 SLC46A1Q96NT5 459 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 PSKH2Q96QS6 385 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 PEBP4Q96S96 227 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 KCTD15Q96SI1 283 aaPredicted RBP17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 LGMNQ99538 433 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 CINPQ9BW66 212 aaPredicted RBP17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 ZWILCHQ9H900 591 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 SP110Q9HB58 689 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 ASCL3Q9NQ33 180 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 KCTD5Q9NXV2 234 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 CNOT8Q9UFF9 292 aaKnown RBP17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 DOLKQ9UPQ8 538 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 RAI2Q9Y5P3 530 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 DGKBQ9Y6T7 804 aa17.82■□□□□ 0.44
PTPMT1-201ENST00000326656 A0A1B0GTH6 734 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 TMX2-CTNND1H3BSU7 103 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 DDX3XO00571 662 aaKnown RBP eCLIP17.81■□□□□ 0.448e-8■■■■■ 40
PTPMT1-201ENST00000326656 ATXN7O15265 892 aaPredicted RBP17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 LRCH4O75427 683 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 KELP23276 732 aa17.81■□□□□ 0.44
PTPMT1-201ENST00000326656 RBMS1P29558 406 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms