RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 CSHL1Q14406 222 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 EML3Q32P44 896 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 Q3C1V9 767 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 ZNF829Q3KNS6 432 aaPredicted RBP16.83■□□□□ 0.28
SSH1-201ENST00000326470 BTBD8Q5XKL5 378 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 SLC27A1Q6PCB7 646 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 LARP4Q71RC2 724 aaKnown RBP eCLIP16.83■□□□□ 0.28
SSH1-201ENST00000326470 FUNDC1Q8IVP5 155 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.83■□□□□ 0.28
SSH1-201ENST00000326470 PCYOX1LQ8NBM8 494 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 SPATA22Q8NHS9 363 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 BORCS5Q969J3 196 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 THAP11Q96EK4 314 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 TBL1YQ9BQ87 522 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 GPATCH1Q9BRR8 931 aaKnown RBP16.83■□□□□ 0.28
SSH1-201ENST00000326470 TRIM15Q9C019 465 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 SFMBT1Q9UHJ3 866 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 AURKCQ9UQB9 309 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 ZNF711Q9Y462 761 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 TRAF6Q9Y4K3 522 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 RALGAPA2Q2PPJ7 1873 aa16.83■□□□□ 0.28
SSH1-201ENST00000326470 KANSL1LA0AUZ9 987 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 DHRS12A0PJE2 317 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 H3BMQ9 156 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 CD4P01730 458 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 YWHAQP27348 245 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 DCKP27707 260 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 GJA9P57773 515 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 NAA20P61599 178 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 ZNF280DQ6N043 979 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 PAQR9Q6ZVX9 377 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 RPS27LQ71UM5 84 aaKnown RBP16.82■□□□□ 0.28
SSH1-201ENST00000326470 GPC2Q8N158 579 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 PPHLN1Q8NEY8 458 aaKnown RBP16.82■□□□□ 0.28
SSH1-201ENST00000326470 SLC45A3Q96JT2 553 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 ZNF560Q96MR9 790 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 COG8Q96MW5 612 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 TSGA13Q96PP4 275 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 CROCCQ5TZA2 2017 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 GIPC1O14908 333 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 CPB1P15086 417 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 ATP6V0D1P61421 351 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 LAMC2Q13753 1193 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 INPP5AQ14642 412 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 ARL13BQ3SXY8 428 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 DENND5AQ6IQ26 1287 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 CYHR1Q6ZMK1 362 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 RETREG3Q86VR2 466 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 OSTM1Q86WC4 334 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 GOLM1Q8NBJ4 401 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 PTCD2Q8WV60 388 aaKnown RBP16.82■□□□□ 0.28
SSH1-201ENST00000326470 COX4I2Q96KJ9 171 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 C9orf16Q9BUW7 83 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 PAIP1Q9H074 479 aaKnown RBP16.82■□□□□ 0.28
SSH1-201ENST00000326470 ADAMTS10Q9H324 1103 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 GPRC5DQ9NZD1 345 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 ABCD2Q9UBJ2 740 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 SLC2A6Q9UGQ3 507 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 BLOC1S6Q9UL45 172 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 TCAF1Q9Y4C2 921 aa16.82■□□□□ 0.28
SSH1-201ENST00000326470 BBIP1A8MTZ0 92 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 TMX2-CTNND1H3BSU7 103 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 BOLA2-SMG1P6H3BVE0 249 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 NME4O00746 187 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 CLASP2O75122 1294 aaKnown RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 RECQL4O94761 1208 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 C7P10643 843 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 PORP16435 677 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 IL10P22301 178 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 FASP25445 335 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 PMS2P3Q13401 168 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 KCTD2Q14681 263 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 ATP6AP1Q15904 470 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 GJC2Q5T442 439 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 AGAP9Q5VTM2 703 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 ZNF470Q6ECI4 717 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 CLEC20AQ6ZU45 233 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 ARMCX2Q7L311 632 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 CCDC117Q8IWD4 279 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 COLGALT2Q8IYK4 626 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 TERB1Q8NA31 727 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 USP33Q8TEY7 942 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 RSPH1Q8WYR4 309 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 HOPXQ9BPY8 73 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 CD320Q9NPF0 282 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 FBXO5Q9UKT4 447 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 PCDHGA4Q9Y5G9 962 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 RNF103-CHMP3A0A140T963 221 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 TRIM64BA6NI03 449 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 UNCXA6NJT0 531 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 HUS1O60921 280 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 SUPT3HO75486 399 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 SEC24DO94855 1032 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 MT-CYBP00156 380 aaPredicted RBP16.81■□□□□ 0.28
SSH1-201ENST00000326470 UGT1A6P19224 532 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 GPX3P22352 226 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 PNPLA4P41247 253 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 TAF6P49848 677 aa16.81■□□□□ 0.28
SSH1-201ENST00000326470 ZNF135P52742 658 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms