RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SAMD4BQ5PRF9 694 aaKnown RBP13.53□□□□□ -0.24
SKA3-202ENST00000314759 DENND5AQ6IQ26 1287 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 ARHGAP36Q6ZRI8 547 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 GPR141Q7Z602 305 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 CUZD1Q86UP6 607 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 DHFR2Q86XF0 187 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 EFHD1Q9BUP0 239 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 COLEC11Q9BWP8 271 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 RNF39Q9H2S5 420 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 SELENONQ9NZV5 590 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 CROTQ9UKG9 612 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 A0A0G2JLL6 359 aaPredicted RBP13.53□□□□□ -0.24
SKA3-202ENST00000314759 DLGAP1O14490 977 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 AKAP10O43572 662 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 CACNG3O60359 315 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 GPC4O75487 556 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 LRIG2O94898 1065 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 YWHAQP27348 245 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 ETFBP38117 255 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 GRIA3P42263 894 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 SLC7A2P52569 658 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 PLK1P53350 603 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 LILRA4P59901 499 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
SKA3-202ENST00000314759 KIAA0319Q5VV43 1072 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 NOTUMQ6P988 496 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 PRRT2Q7Z6L0 340 aaPredicted RBP13.53□□□□□ -0.24
SKA3-202ENST00000314759 RNF135Q8IUD6 432 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 IPMKQ8NFU5 416 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 TBL1YQ9BQ87 522 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 SLC25A23Q9BV35 468 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 FAM49AQ9H0Q0 323 aaPredicted RBP13.53□□□□□ -0.24
SKA3-202ENST00000314759 SFMBT1Q9UHJ3 866 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 PPP2R3BQ9Y5P8 575 aa13.53□□□□□ -0.24
SKA3-202ENST00000314759 RALGAPA2Q2PPJ7 1873 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 A0A087X1B8 175 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 A8MT66 165 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 IPO13O94829 963 aaKnown RBP13.52□□□□□ -0.24
SKA3-202ENST00000314759 MT-CO1P00395 513 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 IGFBP6P24592 240 aaPredicted RBP13.52□□□□□ -0.24
SKA3-202ENST00000314759 PNPLA4P41247 253 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 RXRGP48443 463 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 DAOAP59103 153 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 PSMD5Q16401 504 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 TECRLQ5HYJ1 363 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 RBM20Q5T481 1227 aaKnown RBP13.52□□□□□ -0.24
SKA3-202ENST00000314759 BTBD8Q5XKL5 378 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 ZNF470Q6ECI4 717 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 FAM45BPQ6NSW5 357 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 CYHR1Q6ZMK1 362 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 GPRIN1Q7Z2K8 1008 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 KLHDC8BQ8IXV7 354 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 C2CD4AQ8NCU7 369 aaPredicted RBP13.52□□□□□ -0.24
SKA3-202ENST00000314759 FAM45AQ8TCE6 357 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 FAR2Q96K12 515 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 COX4I2Q96KJ9 171 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 MED10Q9BTT4 135 aa13.52□□□□□ -0.24
SKA3-202ENST00000314759 NRCAMQ92823 1304 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 ATP6AP2A0A1C7CYW4 349 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 ATP6AP2O75787 350 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 FUCA1P04066 466 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 USP17L7P0C7H9 530 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 ATP6V1B2P21281 511 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 WARSP23381 471 aaKnown RBP13.52□□□□□ -0.25
SKA3-202ENST00000314759 LRPAP1P30533 357 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 CD151P48509 253 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 PPIL2Q13356 520 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 LYSMD3Q7Z3D4 306 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 ZNF786Q8N393 782 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 OSMRQ99650 979 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 TKTL2Q9H0I9 626 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 EML4Q9HC35 981 aaKnown RBP13.52□□□□□ -0.25
SKA3-202ENST00000314759 FBRSL1Q9HCM7 1045 aaKnown RBP13.52□□□□□ -0.25
SKA3-202ENST00000314759 MRGBPQ9NV56 204 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 ARMC1Q9NVT9 282 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 COQ6Q9Y2Z9 468 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 AAR2Q9Y312 384 aaKnown RBP13.52□□□□□ -0.25
SKA3-202ENST00000314759 CSADQ9Y600 493 aa13.52□□□□□ -0.25
SKA3-202ENST00000314759 FUOMA2VDF0 154 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 ASB14A6NK59 587 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 SAC3D1A6NKF1 404 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 PSMD3O43242 534 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 CBFA2T3O75081 653 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 GPR32O75388 356 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 SRP72O76094 671 aaKnown RBP13.51□□□□□ -0.25
SKA3-202ENST00000314759 SEC24DO94855 1032 aaPredicted RBP13.51□□□□□ -0.25
SKA3-202ENST00000314759 CCNA1P78396 465 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 ARL13BQ3SXY8 428 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 SV2CQ496J9 727 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 ZBED5Q49AG3 693 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 ZNF789Q5FWF6 425 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 GRAMD4Q6IC98 578 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 NANOGP8Q6NSW7 305 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 ERMP1Q7Z2K6 904 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 FUNDC1Q8IVP5 155 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 OR2T34Q8NGX1 318 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 OR2T3Q8NH03 318 aa13.51□□□□□ -0.25
SKA3-202ENST00000314759 TRPC4APQ8TEL6 797 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms