RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 WRAP53Q9BUR4 548 aaKnown RBP9.15□□□□□ -0.94
PDE4D-201ENST00000309641 MLPHQ9BV36 600 aaPredicted RBP9.15□□□□□ -0.94
PDE4D-201ENST00000309641 GBA3Q9H227 469 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 RSPH14Q9UHP6 348 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 EIF2B4Q9UI10 523 aaKnown RBP9.15□□□□□ -0.94
PDE4D-201ENST00000309641 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.15□□□□□ -0.94
PDE4D-201ENST00000309641 A0A1W2PQU0 124 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 IGLON5A6NGN9 336 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 PATE3B3GLJ2 98 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 CES2O00748 559 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 RIOK3O14730 519 aaKnown RBP9.15□□□□□ -0.94
PDE4D-201ENST00000309641 CPP00450 1065 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 PIRTP0C851 137 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 CASQ1P31415 396 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 CHRNA4P43681 627 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 FAM193AP78312 1265 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 RALGDSQ12967 914 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 GALNT3Q14435 633 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 ELF2Q15723 593 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 RALGPS1Q5JS13 557 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 CFAP58Q5T655 872 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 ARMC12Q5T9G4 340 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 KIAA0895LQ68EN5 471 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 KDELC1Q6UW63 502 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 LAYNQ6UX15 382 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 TSPAN33Q86UF1 283 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 SNX19Q92543 992 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 MAGOHBQ96A72 148 aaKnown RBP9.15□□□□□ -0.94
PDE4D-201ENST00000309641 RTP4Q96DX8 246 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 MRGPRX2Q96LB1 330 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 FCRL5Q96RD9 977 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 VAT1Q99536 393 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 MYOCQ99972 504 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 PCDH9Q9HC56 1237 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 FZD3Q9NPG1 666 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 B4GALT6Q9UBX8 382 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 TRHDEQ9UKU6 1024 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 CA5BQ9Y2D0 317 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 COQ6Q9Y2Z9 468 aa9.15□□□□□ -0.94
PDE4D-201ENST00000309641 LRRK1Q38SD2 2015 aa9.15□□□□□ -0.95
PDE4D-201ENST00000309641 TNRC6BQ9UPQ9 1833 aaKnown RBP9.15□□□□□ -0.95
PDE4D-201ENST00000309641 GVINP1Q7Z2Y8 2422 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 NPIPB15A6NHN6 443 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 LRRC72A6NJI9 287 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 NEMP1O14524 444 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 SLC31A1O15431 190 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 SLC7A4O43246 635 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 LATO43561 262 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 AP1G1O43747 822 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 MMP20O60882 483 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 RNGTTO60942 597 aaKnown RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 USP12O75317 370 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 GCATO75600 419 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 ITGAVP06756 1048 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 HNF1BP35680 557 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 MMP12P39900 470 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 PI4KAP42356 2102 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 WNT3AP56704 352 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 CREB5Q02930 508 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 SPARCL1Q14515 664 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 ZNF284Q2VY69 593 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 TMEM259Q4ZIN3 620 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 LYSMD4Q5XG99 296 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 DRICH1Q6PGQ1 229 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 LPCAT1Q8NF37 534 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 IPMKQ8NFU5 416 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 CADM4Q8NFZ8 388 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 SPOCK2Q92563 424 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 APOL2Q9BQE5 337 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 IRF2BPLQ9H1B7 796 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 MIR1-1HGQ9H1L0 117 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 ARRDC1-AS1Q9H2J1 176 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 FSCN3Q9NQT6 498 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 FAM153AQ9UHL3 310 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 PTPRZ1P23471 2315 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 PLXNA2O75051 1894 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 FAM186AA6NE01 2351 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 MEI4A8MW99 385 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 PROB1E7EW31 1015 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 RAD51BO15315 384 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 OPHN1O60890 802 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 PAK4O96013 591 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 AGTP01019 485 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 LMNAP02545 664 aaKnown RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 GM2AP17900 193 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 LHCGRP22888 699 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 XPAP23025 273 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 CES1P23141 567 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 RPL22P35268 128 aaKnown RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 CDK18Q07002 472 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 SFSWAPQ12872 951 aaKnown RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 TRIP13Q15645 432 aaPredicted RBP9.14□□□□□ -0.95
PDE4D-201ENST00000309641 CYP1B1Q16678 543 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 QPCTQ16769 361 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 TCEAL6Q6IPX3 200 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 RFLNAQ6ZTI6 216 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 RGL4Q8IZJ4 473 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 C1orf216Q8TAB5 229 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 HCAR2Q8TDS4 363 aa9.14□□□□□ -0.95
PDE4D-201ENST00000309641 MAIP1Q8WWC4 291 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms