RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 PGBD5Q8N414 524 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 C1orf216Q8TAB5 229 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 ECHDC3Q96DC8 303 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 KLHDC7BQ96G42 594 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 AGAP3Q96P47 875 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 VAT1Q99536 393 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 SLC32A1Q9H598 525 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 GAREM1Q9H706 876 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 FSCN3Q9NQT6 498 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 PCDHGC4Q9Y5F7 938 aa19.96■□□□□ 0.79
VEGFB-201ENST00000309422 IGLON5A6NGN9 336 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 PECAM1P16284 738 aaPredicted RBP19.95■□□□□ 0.79
VEGFB-201ENST00000309422 XRCC4Q13426 336 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 KIF19Q2TAC6 998 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 TMEM52BQ4KMG9 183 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 CCDC70Q6NSX1 233 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 ASB12Q8WXK4 309 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 LRRC45Q96CN5 670 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 ADGRE3Q9BY15 652 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 FZD3Q9NPG1 666 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 RXFP3Q9NSD7 469 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 KCTD5Q9NXV2 234 aa19.95■□□□□ 0.79
VEGFB-201ENST00000309422 PACSIN2Q9UNF0 486 aaPredicted RBP19.95■□□□□ 0.79
VEGFB-201ENST00000309422 ZFR2Q9UPR6 939 aaKnown RBP19.95■□□□□ 0.79
VEGFB-201ENST00000309422 PTPRZ1P23471 2315 aaPredicted RBP19.95■□□□□ 0.78
VEGFB-201ENST00000309422 TLR4O00206 839 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 RIOK3O14730 519 aaKnown RBP19.95■□□□□ 0.78
VEGFB-201ENST00000309422 HTRA2O43464 458 aaPredicted RBP19.95■□□□□ 0.78
VEGFB-201ENST00000309422 PGLSO95336 258 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 PAK4O96013 591 aaPredicted RBP19.95■□□□□ 0.78
VEGFB-201ENST00000309422 MMP12P39900 470 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 RABIFP47224 123 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 DSC2Q02487 901 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 SLC14A1Q13336 389 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 GSE1Q14687 1217 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 PRKD1Q15139 912 aaPredicted RBP19.95■□□□□ 0.78
VEGFB-201ENST00000309422 HLA-BQ31612 363 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 ALG1LQ6GMV1 187 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 LAYNQ6UX15 382 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 LRRN4Q8WUT4 740 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 HTR3CQ8WXA8 447 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 IFT43Q96FT9 208 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 QKIQ96PU8 341 aaKnown RBP eCLIP19.95■□□□□ 0.78
VEGFB-201ENST00000309422 IL12RB2Q99665 862 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 SAE1Q9UBE0 346 aaPredicted RBP19.95■□□□□ 0.78
VEGFB-201ENST00000309422 GGT7Q9UJ14 662 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 GVINP1Q7Z2Y8 2422 aa19.95■□□□□ 0.78
VEGFB-201ENST00000309422 TNRC6BQ9UPQ9 1833 aaKnown RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 A0A0U1RQJ8 604 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 TTC24A2A3L6 582 aaPredicted RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 CFAP69A5D8W1 941 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 TRAFD1O14545 582 aaPredicted RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 MMP20O60882 483 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 GJB3O75712 270 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 THEGLP0DJG4 465 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 C6P13671 934 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 CD86P42081 329 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 LIG3P49916 1009 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 PEX5P50542 639 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 EIF3EP60228 445 aaKnown RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 RPL26P61254 145 aaKnown RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 TRAF2Q12933 501 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 ZBTB17Q13105 803 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 ZNF211Q13398 564 aaPredicted RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 NOMO1Q15155 1222 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 ITPRIPL1Q6GPH6 555 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 KYAT3Q6YP21 454 aaKnown RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 DPPA4Q7L190 304 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 DCP2Q8IU60 420 aaKnown RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 SPOCK2Q92563 424 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 ALG3Q92685 438 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 RMDN1Q96DB5 314 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 HES6Q96HZ4 224 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 ORAI3Q9BRQ5 295 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 CEP41Q9BYV8 373 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 EBF2Q9HAK2 575 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 DNAAF2Q9NVR5 837 aaKnown RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 RPL26L1Q9UNX3 145 aaKnown RBP19.94■□□□□ 0.78
VEGFB-201ENST00000309422 SNX11Q9Y5W9 270 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 HS3ST3A1Q9Y663 406 aa19.94■□□□□ 0.78
VEGFB-201ENST00000309422 SDK1Q7Z5N4 2213 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 PYGMP11217 842 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 VIPR1P32241 457 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 CTSKP43235 329 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 THOP1P52888 689 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 OTUD4Q01804 1114 aaKnown RBP19.93■□□□□ 0.78
VEGFB-201ENST00000309422 PTK2BQ14289 1009 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 LRRC14Q15048 493 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 TEX44Q53QW1 395 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 HS1BP3Q53T59 392 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 DARS2Q6PI48 645 aaKnown RBP19.93■□□□□ 0.78
VEGFB-201ENST00000309422 DGLUCYQ7Z3D6 616 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 TMEM145Q8NBT3 493 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 ATL2Q8NHH9 583 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 ACTL9Q8TC94 416 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 PPP1R2P1Q96PQ5 205 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 LENG8Q96PV6 779 aaPredicted RBP19.93■□□□□ 0.78
VEGFB-201ENST00000309422 C1QTNF2Q9BXJ5 285 aa19.93■□□□□ 0.78
VEGFB-201ENST00000309422 TDRD1Q9BXT4 1180 aaKnown RBP19.93■□□□□ 0.78
VEGFB-201ENST00000309422 SLC25A51Q9H1U9 297 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms