RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 ATP8A1Q9Y2Q0 1164 aa19.98■□□□□ 0.79
PDZRN3-202ENST00000308537 HTRA2O43464 458 aaPredicted RBP19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 MFSD11O43934 449 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 CKMT2P17540 419 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 ELP6Q0PNE2 266 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 IHHQ14623 411 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 IRF4Q15306 451 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 NCBP2-AS2Q69YL0 99 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 ZNF548Q8NEK5 533 aaPredicted RBP19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 CXorf40AQ8TE69 158 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 FUBP1Q96AE4 644 aaKnown RBP19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 MGME1Q9BQP7 344 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 ATP13A3Q9H7F0 1226 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 DNAJC28Q9NX36 388 aa19.97■□□□□ 0.79
PDZRN3-202ENST00000308537 URB1O60287 2271 aaKnown RBP19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 SRRM3A6NNA2 597 aaPredicted RBP19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 SCAMP1O15126 338 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 NEBLO76041 1014 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 H2AFZP0C0S5 128 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 TMEM253P0C7T8 217 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 SERPINA4P29622 427 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 SCNN1BP51168 640 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 ADKP55263 362 aaKnown RBP19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 AP1S1P61966 158 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 PAFAH1B3Q15102 231 aaKnown RBP19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 CCDC157Q569K6 752 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 H2AFVQ71UI9 128 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 PROSER1Q86XN7 944 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 RBFAQ8N0V3 343 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 GALNT15Q8N3T1 639 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 TEX26Q8N6G2 289 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 PQLC3Q8N755 202 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 RFFLQ8WZ73 363 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 CTTNBP2NLQ9P2B4 639 aa19.96■□□□□ 0.79
PDZRN3-202ENST00000308537 ITPR1Q14643 2758 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 CFAP69A5D8W1 941 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 K7ESM1 405 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 FFAR2O15552 330 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 MTA2O94776 668 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 MAN1A1P33908 653 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 LIG3P49916 1009 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 HNRNPKP61978 463 aaKnown RBP eCLIP19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 YPEL5P62699 121 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 ILKQ13418 452 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 KCTD16Q68DU8 428 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 LIPIQ6XZB0 460 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 TMPRSS12Q86WS5 348 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 FAM181AQ8N9Y4 354 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 CTNNBL1Q8WYA6 563 aaPredicted RBP19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 NUDCD1Q96RS6 583 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 ZNF670Q9BS34 389 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 SPTLC3Q9NUV7 552 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 NLGN3Q9NZ94 848 aa19.95■□□□□ 0.78
PDZRN3-202ENST00000308537 GCATO75600 419 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 CKMT1AP12532 417 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 MYF5P13349 255 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 SERPINB6P35237 376 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 MAXP61244 160 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 BCL2L1Q07817 233 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 GALNT2Q10471 571 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 TRAF2Q12933 501 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 ANKRD20A8PQ5CZ79 823 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 SARM1Q6SZW1 724 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 MACC1Q6ZN28 852 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 DPPA4Q7L190 304 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 PELI3Q8N2H9 469 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 CBARPQ8N350 705 aaPredicted RBP19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 ATPAF2Q8N5M1 289 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 MDM1Q8TC05 714 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 MAML1Q92585 1016 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 APOLD1Q96LR9 279 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 NHEJ1Q9H9Q4 299 aaPredicted RBP19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 NOD2Q9HC29 1040 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 DKK4Q9UBT3 224 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 PCDHGC4Q9Y5F7 938 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 CSNK1G3Q9Y6M4 447 aa19.94■□□□□ 0.78
PDZRN3-202ENST00000308537 TRABD2BA6NFA1 517 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 TOR1BO14657 336 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 CDK4P11802 303 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 JUNDP17535 347 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 HSPA9P38646 679 aaKnown RBP19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 GARSP41250 739 aaKnown RBP19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 RENBPP51606 427 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 SLC10A2Q12908 348 aaPredicted RBP19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 KRT81Q14533 505 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 LRRC14Q15048 493 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 HADHQ16836 314 aaKnown RBP19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 HES3Q5TGS1 186 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 ALG1LQ6GMV1 187 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 ERAP2Q6P179 960 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 PLA2G15Q8NCC3 412 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 SLC35G2Q8TBE7 412 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 RAPGEF5Q92565 580 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 LRRC61Q9BV99 259 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 CLPBQ9H078 707 aa19.93■□□□□ 0.78
PDZRN3-202ENST00000308537 C3orf70A6NLC5 250 aaPredicted RBP19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 AQP9O43315 295 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 FZD6O60353 706 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 SOCS5O75159 536 aa19.92■□□□□ 0.78
PDZRN3-202ENST00000308537 MAP3K6O95382 1288 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms