RNA–Protein interactions for RNA: ENST00000307767.12

TVP23B-201, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TVP23B, Length 2,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-201ENST00000307767 F11P03951 625 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 PIRTP0C851 137 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 EZRP15311 586 aaKnown RBP16.6■□□□□ 0.25
TVP23B-201ENST00000307767 KCNC1P48547 511 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 CLCN5P51795 746 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 PRKAA2P54646 552 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 TLE2Q04725 743 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 GALNT3Q14435 633 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 KDM1BQ8NB78 822 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 OR13C4Q8NGS5 318 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 CALML6Q8TD86 181 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 DNAJC1Q96KC8 554 aaKnown RBP16.6■□□□□ 0.25
TVP23B-201ENST00000307767 SMIM14Q96QK8 99 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 PSKH2Q96QS6 385 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 CDK5RAP1Q96SZ6 601 aaKnown RBP16.6■□□□□ 0.25
TVP23B-201ENST00000307767 MRPL57Q9BQC6 102 aaKnown RBP16.6■□□□□ 0.25
TVP23B-201ENST00000307767 KLF16Q9BXK1 252 aaPredicted RBP16.6■□□□□ 0.25
TVP23B-201ENST00000307767 SPO11Q9Y5K1 396 aa16.6■□□□□ 0.25
TVP23B-201ENST00000307767 A0A088AWK7 358 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 C2orf78A6NCI8 922 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 KDELR3O43731 214 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 CD160O95971 181 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 HLA-DPA1P20036 260 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 RPL14P50914 215 aaKnown RBP16.59■□□□□ 0.25
TVP23B-201ENST00000307767 PFKPQ01813 784 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 DSG1Q02413 1049 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 CSHL1Q14406 222 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 NAA25Q14CX7 972 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 CYTH1Q15438 398 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 TSNAXIP1Q2TAA8 658 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 PDZD8Q8NEN9 1154 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 KCNV2Q8TDN2 545 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 MCUR1Q96AQ8 359 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 SGF29Q96ES7 293 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 ZFRQ96KR1 1074 aaKnown RBP16.59■□□□□ 0.25
TVP23B-201ENST00000307767 SHCBP1LQ9BZQ2 653 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 ZNF385DQ9H6B1 395 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 SLC7A8Q9UHI5 535 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 AGO1Q9UL18 857 aaKnown RBP16.59■□□□□ 0.25
TVP23B-201ENST00000307767 MICAL3Q7RTP6 2002 aa16.59■□□□□ 0.25
TVP23B-201ENST00000307767 E9PBE3 544 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 H0Y3Z8 333 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 KLHL41O60662 606 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 KRT36O76013 467 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 FGF1P05230 155 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 CORO1AP31146 461 aaKnown RBP16.58■□□□□ 0.25
TVP23B-201ENST00000307767 DNAJB13P59910 316 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 SLC25A3Q00325 362 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 ZNF235Q14590 738 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 TRIM60Q495X7 471 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 CXorf57Q6NSI4 855 aaKnown RBP16.58■□□□□ 0.25
TVP23B-201ENST00000307767 ULK2Q8IYT8 1036 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 OR6P1Q8NGX9 317 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 RETREG1Q9H6L5 497 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 RC3H2Q9HBD1 1191 aaKnown RBP16.58■□□□□ 0.25
TVP23B-201ENST00000307767 TNFRSF12AQ9NP84 129 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.58■□□□□ 0.25
TVP23B-201ENST00000307767 TBC1D30Q9Y2I9 924 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 VWA7Q9Y334 891 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 YIPF1Q9Y548 306 aa16.58■□□□□ 0.25
TVP23B-201ENST00000307767 CCDC162PA2VCL2 907 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 HDAC3O15379 428 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 DCXO43602 365 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 GREM1O60565 184 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 GOT2P00505 430 aaKnown RBP16.58■□□□□ 0.24
TVP23B-201ENST00000307767 SOD2P04179 222 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 PRSS56P0CW18 603 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 SLC11A2P49281 568 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 GTF2A1P52655 376 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-201ENST00000307767 METTL21CQ5VZV1 264 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 GPR150Q8NGU9 434 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 BRSK1Q8TDC3 778 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 BLOC1S5Q8TDH9 187 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 PEX13Q92968 403 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 PLD4Q96BZ4 506 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 ZNF689Q96CS4 500 aaPredicted RBP16.58■□□□□ 0.24
TVP23B-201ENST00000307767 TSNARE1Q96NA8 513 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 ZNF570Q96NI8 536 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 DCLRE1BQ9H816 532 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 HSFX1Q9UBD0 423 aa16.58■□□□□ 0.24
TVP23B-201ENST00000307767 GOLGA8QA0A0J9YX86 632 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 GOLGA8OA6NCC3 632 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 TMEM233B4DJY2 109 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 GOLGA8NF8WBI6 632 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 PSMA3P25788 255 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 EPHA3P29320 983 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 ZXDBP98169 803 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 KLF10Q13118 480 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 PRKAA1Q13131 559 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 PEX6Q13608 980 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 LSM12Q3MHD2 195 aaKnown RBP16.57■□□□□ 0.24
TVP23B-201ENST00000307767 RALGPS1Q5JS13 557 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 IL31Q6EBC2 164 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 PIM3Q86V86 326 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 SLC39A11Q8N1S5 342 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 ADAMTS19Q8TE59 1207 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 PDCD6IPQ8WUM4 868 aaKnown RBP16.57■□□□□ 0.24
TVP23B-201ENST00000307767 STON2Q8WXE9 905 aa16.57■□□□□ 0.24
TVP23B-201ENST00000307767 TRMT2BQ96GJ1 504 aaKnown RBP16.57■□□□□ 0.24
TVP23B-201ENST00000307767 PANX3Q96QZ0 392 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms