RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 PCDHB11Q9Y5F2 797 aa10.76□□□□□ -0.69
SYNPO2-201ENST00000307142 A0A1W2PQ67 120 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CFAP73A6NFT4 308 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 LIASO43766 372 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 TPST1O60507 370 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 RPIAP49247 311 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 WNT3AP56704 352 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CSTF3Q12996 717 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 SUZ12Q15022 739 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 GPAT3Q53EU6 434 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 UBE2R2Q712K3 238 aaPredicted RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CHST15Q7LFX5 561 aaPredicted RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 P3H2Q8IVL5 708 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 WFIKKN2Q8TEU8 576 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 SEC16BQ96JE7 1060 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 KREMEN1Q96MU8 473 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CCT7Q99832 543 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 MYH7P12883 1935 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CDK14O94921 469 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 SPAM1P38567 509 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 COPZ1P61923 177 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 AUHQ13825 339 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 MMAAQ8IVH4 418 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ZNF398Q8TD17 642 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PXYLP1Q8TE99 480 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 INPP5DQ92835 1189 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 GMLQ99445 158 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 NMUR1Q9HB89 426 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PCDH12Q9NPG4 1184 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 KLHL20Q9Y2M5 609 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 RASSF10A6NK89 507 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 SLC25A12O75746 678 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CXCR3P49682 368 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ECT2LQ008S8 904 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CERS2Q96G23 380 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CCT8L2Q96SF2 557 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PHACTR1Q9C0D0 580 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 SMG9Q9H0W8 520 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 DZANK1Q9NVP4 752 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PSMD13Q9UNM6 376 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 LRRC14BA6NHZ5 514 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ENPP3O14638 875 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 FYNP06241 537 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 HOXB8P17481 243 aaPredicted RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CLCN5P51795 746 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 CHRNB3Q05901 458 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 USP39Q53GS9 565 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PHF19Q5T6S3 580 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ZNF784Q8NCA9 323 aaPredicted RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 FIG4Q92562 907 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 OSBPL6Q9BZF3 934 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 FZD8Q9H461 694 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PCDH18Q9HCL0 1135 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 SCN3BQ9NY72 215 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 TCF3P15923 654 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ITGAXP20702 1163 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 SLC20A2Q08357 652 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 DLG2Q15700 870 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 TAC4Q86UU9 113 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 SPPL2AQ8TCT8 520 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 BPIFB1Q8TDL5 484 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ASZ1Q8WWH4 475 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 TNFRSF25Q93038 417 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 FUBP3Q96I24 572 aaKnown RBP eCLIP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 OSBPL2Q9H1P3 480 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ZNF711Q9Y462 761 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ALS2Q96Q42 1657 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 RIPK2O43353 540 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 GMFGO60234 142 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ERN1O75460 977 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ITGAVP06756 1048 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PABPC1P11940 636 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 MTHFRP42898 656 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PRKAA2P54646 552 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ZSCAN18Q8TBC5 510 aaPredicted RBP10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 POLR1BQ9H9Y6 1135 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 ALKBH4Q9NXW9 302 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 PCDHGC5Q9Y5F6 944 aa10.75□□□□□ -0.69
SYNPO2-201ENST00000307142 VPS4BO75351 444 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 TBX18O95935 607 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 F2P00734 622 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 ASLP04424 464 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 CCT8P50990 548 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 ATXN7L2Q5T6C5 722 aaPredicted RBP10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 DNAJC14Q6Y2X3 702 aaPredicted RBP10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 OR4K2Q8NGD2 314 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 FBXL18Q96ME1 805 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 GKN1Q9NS71 199 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 SYBUQ9NX95 663 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 ALDH4A1P30038 563 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 FAAP100Q0VG06 881 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 TAF13Q15543 124 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 NDUFA9Q16795 377 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 LRRC38Q5VT99 294 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 PDE12Q6L8Q7 609 aaKnown RBP10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 ENPP7Q6UWV6 458 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 RNF44Q7L0R7 432 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 SCAIQ8N9R8 606 aa10.74□□□□□ -0.69
SYNPO2-201ENST00000307142 IRF7Q92985 503 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms