RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 NEURL2Q9BR09 285 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 NIFKQ9BYG3 293 aaKnown RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 TMED5Q9Y3A6 229 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 SULT1E1P49888 294 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 PRKAA2P54646 552 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 YWHAHQ04917 246 aaPredicted RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 GJC2Q5T442 439 aaPredicted RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 LYSMD3Q7Z3D4 306 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 PIGZQ86VD9 579 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 TTC30AQ86WT1 665 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 FCRL3Q96P31 734 aaPredicted RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 C9orf16Q9BUW7 83 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 DNAJC25-GNG10A0A024R161 153 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 FAM189A1O60320 539 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 JCHAINP01591 159 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 TUFMP49411 452 aaKnown RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 SLC26A2P50443 739 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 NFATC3Q12968 1075 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 SLC13A2Q13183 592 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 MXD4Q14582 209 aaPredicted RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 FAM110CQ1W6H9 321 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 EEF1DP3Q658K8 133 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 ARHGAP17Q68EM7 881 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 POC5Q8NA72 575 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 OR2T34Q8NGX1 318 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 OR2T3Q8NH03 318 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 HM13Q8TCT9 377 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 NTPCRQ9BSD7 190 aaKnown RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 SIK2Q9H0K1 926 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 UNC93B1Q9H1C4 597 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 HMG20AQ9NP66 347 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 GIMAP4Q9NUV9 329 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 AKT3Q9Y243 479 aa14.95□□□□□ -0.02
SPIDR-201ENST00000297423 FAM32AQ9Y421 112 aaKnown RBP14.95□□□□□ -0.02
SPIDR-201ENST00000297423 MANSC4A6NHS7 340 aaPredicted RBP14.94□□□□□ -0.02
SPIDR-201ENST00000297423 SLC7A1P30825 629 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 OPRL1P41146 370 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 ADCYAP1R1P41586 468 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 EFNA5P52803 228 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 SF3B4Q15427 424 aaKnown RBP eCLIP14.94□□□□□ -0.025e-7■■□□□ 13.2
SPIDR-201ENST00000297423 KCNJ8Q15842 424 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 INAQ16352 499 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 MOGQ16653 247 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 DENND6AQ8IWF6 608 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 SYTL1Q8IYJ3 562 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 AFG1LQ8WV93 481 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 HDAC10Q969S8 669 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 BAG5Q9UL15 447 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 PMPCBO75439 489 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 STMN1P16949 149 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 MPP1Q00013 466 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 NFYCQ13952 458 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 PLD3Q8IV08 490 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 MICU2Q8IYU8 434 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 NIPA2Q8N8Q9 360 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 IRGQQ8WZA9 623 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 RANBP9Q96S59 729 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 NPLQ9BXD5 320 aaPredicted RBP14.94□□□□□ -0.02
SPIDR-201ENST00000297423 PLAC1Q9HBJ0 212 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 BTRCQ9Y297 605 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 ADGRA2Q96PE1 1338 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 AURKAO14965 403 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 TIMM44O43615 452 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 MFSD11O43934 449 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 SYNCRIPO60506 623 aaKnown RBP14.94□□□□□ -0.02
SPIDR-201ENST00000297423 S100A1P23297 94 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 ADSLP30566 484 aaPredicted RBP14.94□□□□□ -0.02
SPIDR-201ENST00000297423 PTPN7P35236 360 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 BORAQ6PGQ7 559 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 OR6J1Q8NGC5 347 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 NSMCE3Q96MG7 304 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 RBBP8Q99708 897 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 C6orf62Q9GZU0 229 aaPredicted RBP14.94□□□□□ -0.02
SPIDR-201ENST00000297423 DPP3Q9NY33 737 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 DTLQ9NZJ0 730 aa14.94□□□□□ -0.02
SPIDR-201ENST00000297423 PRRC2BQ5JSZ5 2229 aaKnown RBP14.94□□□□□ -0.02
SPIDR-201ENST00000297423 TCAF2A6NFQ2 919 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 PFDN6O15212 129 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 GAS2O43903 313 aaKnown RBP14.93□□□□□ -0.02
SPIDR-201ENST00000297423 LDLRP01130 860 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 MATN1P21941 496 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 CAPSQ13938 189 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 ANKRD26P1Q6NSI1 321 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 EFCAB12Q6NXP0 572 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 PMF1Q6P1K2 205 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 PLPPR4Q7Z2D5 763 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 DSG4Q86SJ6 1040 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 GATAD2AQ86YP4 633 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 CCDC185Q8N715 623 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 MOCS1Q9NZB8 636 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 U3KQV3 271 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 CLDN25C9JDP6 229 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 GSTA4O15217 222 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 MAFO75444 373 aaPredicted RBP14.93□□□□□ -0.02
SPIDR-201ENST00000297423 CHEK2O96017 543 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 EDN1P05305 212 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 ALDH3B2P48448 385 aa14.93□□□□□ -0.02
SPIDR-201ENST00000297423 ZNF362Q5T0B9 420 aaPredicted RBP14.93□□□□□ -0.02
SPIDR-201ENST00000297423 ATF7IP2Q5U623 682 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms