RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 ANKRD49Q8WVL7 239 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 CDK5RAP1Q96SZ6 601 aaKnown RBP19.39■□□□□ 0.69
BRAF-201ENST00000288602 DRC3Q9H069 523 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 ILKAPQ9H0C8 392 aaPredicted RBP19.39■□□□□ 0.69
BRAF-201ENST00000288602 MAGEH1Q9H213 219 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 IGSF5Q9NSI5 407 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 CHD5Q8TDI0 1954 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 LOC100653049A0A140TA62 436 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 DCXO43602 365 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 KRT34O76011 436 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 WFS1O76024 890 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 SERPINF2P08697 491 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 CCDC166P0CW27 439 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 COL6A2P12110 1019 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 EZRP15311 586 aaKnown RBP19.39■□□□□ 0.69
BRAF-201ENST00000288602 CDKN2DP55273 166 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 DEFB103AP81534 67 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 EML3Q32P44 896 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 HECTD2Q5U5R9 776 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 TMPRSS6Q8IU80 811 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 TXNDC5Q8NBS9 432 aaKnown RBP19.39■□□□□ 0.69
BRAF-201ENST00000288602 PDZD8Q8NEN9 1154 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 SHKBP1Q8TBC3 707 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 SLC22A12Q96S37 553 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 CINPQ9BW66 212 aaPredicted RBP19.39■□□□□ 0.69
BRAF-201ENST00000288602 GPAMQ9HCL2 828 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 CYP4F12Q9HCS2 524 aa19.39■□□□□ 0.69
BRAF-201ENST00000288602 G3BP2Q9UN86 482 aaKnown RBP19.39■□□□□ 0.69
BRAF-201ENST00000288602 PAPSS2O95340 614 aaPredicted RBP19.38■□□□□ 0.69
BRAF-201ENST00000288602 S1PR4O95977 384 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 GOT2P00505 430 aaKnown RBP19.38■□□□□ 0.69
BRAF-201ENST00000288602 SOD2P04179 222 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 JUNP05412 331 aaKnown RBP19.38■□□□□ 0.69
BRAF-201ENST00000288602 OXCT1P55809 520 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 TWF1Q12792 350 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 FAM219BQ5XKK7 198 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 LINGO4Q6UY18 593 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 KIAA0408Q6ZU52 694 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 LSMEM2Q8N112 164 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 RDH11Q8TC12 318 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 FAM161BQ96MY7 647 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 STN1Q9H668 368 aaKnown RBP19.38■□□□□ 0.69
BRAF-201ENST00000288602 RNPEPL1Q9HAU8 725 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 TRPC7Q9HCX4 862 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 UBA2Q9UBT2 640 aaPredicted RBP19.38■□□□□ 0.69
BRAF-201ENST00000288602 MID2Q9UJV3 735 aa19.38■□□□□ 0.69
BRAF-201ENST00000288602 SLC7A4O43246 635 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 ZBTB14O43829 449 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 ZMPSTE24O75844 475 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 RHOCP08134 193 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 AOC1P19801 751 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 KCNA5P22460 613 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 EPHA3P29320 983 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 PLK1P53350 603 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 SLC25A3Q00325 362 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 SEMA3AQ14563 771 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 PTPRRQ15256 657 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 ACBD5Q5T8D3 534 aaPredicted RBP19.37■□□□□ 0.69
BRAF-201ENST00000288602 TMEM207Q6UWW9 146 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 TMEM169Q96HH4 297 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 FEM1CQ96JP0 617 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 THTPAQ9BU02 230 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 NUF2Q9BZD4 464 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 MRPL46Q9H2W6 279 aaKnown RBP19.37■□□□□ 0.69
BRAF-201ENST00000288602 MFSD1Q9H3U5 465 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 A0A087X1B8 175 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 A0A0U1RQS6 177 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 TMEM233B4DJY2 109 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 PRRG1O14668 218 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 POLD2P49005 469 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 ACSBG2Q5FVE4 666 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 WASHC2DQ5SRD0 308 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 POMKQ9H5K3 350 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 RAP2CQ9Y3L5 183 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 PCDHGC4Q9Y5F7 938 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 COL4A6Q14031 1691 aa19.37■□□□□ 0.69
BRAF-201ENST00000288602 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.36■□□□□ 0.69
BRAF-201ENST00000288602 CCDC162PA2VCL2 907 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 H2AFYO75367 372 aaKnown RBP19.36■□□□□ 0.69
BRAF-201ENST00000288602 PDHA1P08559 390 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 HNRNPLP14866 589 aaKnown RBP eCLIP19.36■□□□□ 0.697e-7■■■■□ 23.9
BRAF-201ENST00000288602 TFEBP19484 476 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 RPL14P50914 215 aaKnown RBP19.36■□□□□ 0.69
BRAF-201ENST00000288602 ZNF177Q13360 481 aaPredicted RBP19.36■□□□□ 0.69
BRAF-201ENST00000288602 FSCBQ5H9T9 825 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 RNF219Q5W0B1 726 aaPredicted RBP19.36■□□□□ 0.69
BRAF-201ENST00000288602 RMDN1Q96DB5 314 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 MGME1Q9BQP7 344 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 MUC3BQ9H195 1237 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 EBF2Q9HAK2 575 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 TMEM39AQ9NV64 488 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 PLA2G4CQ9UP65 541 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 VWA7Q9Y334 891 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 SPO11Q9Y5K1 396 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 KDELR3O43731 214 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 CLDN11O75508 207 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 FGF1P05230 155 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 RPSAP08865 295 aaKnown RBP19.36■□□□□ 0.69
BRAF-201ENST00000288602 HLA-DPA1P20036 260 aa19.36■□□□□ 0.69
BRAF-201ENST00000288602 CLCN5P51795 746 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms