RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 FUBP3Q96I24 572 aaKnown RBP eCLIP10.1□□□□□ -0.795e-7■■■■□ 24.5
HMGCR-201ENST00000287936 KLHL5Q96PQ7 755 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 C20orf27Q9GZN8 174 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 MUC3BQ9H195 1237 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 ZDHHC2Q9UIJ5 367 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 PCDHB7Q9Y5E2 793 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 CAPN8A6NHC0 703 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 HMOX2P30519 316 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 CCL14Q16627 93 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 RAB41Q5JT25 222 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 IYDQ6PHW0 289 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 PAQR9Q6ZVX9 377 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 TMEM126BQ8IUX1 230 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 LGI2Q8N0V4 545 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 PDZD8Q8NEN9 1154 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 PGLYRP2Q96PD5 576 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 IL12RB2Q99665 862 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 ACSS2Q9NR19 701 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 UBA2Q9UBT2 640 aaPredicted RBP10.1□□□□□ -0.79
HMGCR-201ENST00000287936 TLR6Q9Y2C9 796 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 NME7Q9Y5B8 376 aa10.1□□□□□ -0.79
HMGCR-201ENST00000287936 MRPL42Q9Y6G3 142 aaKnown RBP10.1□□□□□ -0.79
HMGCR-201ENST00000287936 OR6C75A6NL08 312 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 HAS3O00219 553 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 CD3EAPO15446 510 aaKnown RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 NRP2O60462 931 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 RHOCP08134 193 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 CHRM3P20309 590 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 RGS4P49798 205 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 ATP6V0D1P61421 351 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 NFYCQ13952 458 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 VEPH1Q14D04 833 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 UPP1Q16831 310 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 FAM171A1Q5VUB5 890 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 CTU1Q7Z7A3 348 aaKnown RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 NKAPQ8N5F7 415 aaKnown RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 NRG4Q8WWG1 115 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 HIC2Q96JB3 615 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 SYT17Q9BSW7 474 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 ADGRE3Q9BY15 652 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 KATNBL1Q9H079 304 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 GNGT2O14610 69 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 HOXA2O43364 376 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 F7P08709 466 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 LINGO3P0C6S8 592 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 IL10RBQ08334 325 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 HABP4Q5JVS0 413 aaKnown RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 CNSTQ6PJW8 725 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 AFTPHQ6ULP2 937 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 CASP10Q92851 521 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 MS4A4AQ96JQ5 239 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 ZBTB26Q9HCK0 441 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 APPL1Q9UKG1 709 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 ABT1Q9ULW3 272 aaKnown RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 PKP3Q9Y446 797 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 AZIN1O14977 448 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 RPP40O75818 363 aaKnown RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 PAPSS2O95340 614 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 C1QAP02745 245 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 SLC35E2BP0CK96 405 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 SLC26A3P40879 764 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 MLLT6P55198 1093 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 DSC2Q02487 901 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 PLOD1Q02809 727 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 TBCELQ5QJ74 424 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 IFNEQ86WN2 208 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 ZSCAN18Q8TBC5 510 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 NRBF2Q96F24 287 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 HMCESQ96FZ2 354 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 EGFL8Q99944 293 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 MFSD1Q9H3U5 465 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 CAAP1Q9H8G2 361 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 ANLNQ9NQW6 1124 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 SLC4A7Q9Y6M7 1214 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 A0A0U1RQF3 1178 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 FASP25445 335 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 PBX3P40426 434 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 MAPKAPK2P49137 400 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 THOP1P52888 689 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 BNIP2Q12982 314 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 CCNIQ14094 377 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 RFTN1Q14699 578 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 TRIP4Q15650 581 aaPredicted RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 DDR2Q16832 855 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 PFKFB4Q16877 469 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 KCTD11Q693B1 232 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 GLT6D1Q7Z4J2 308 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 OR56A4Q8NGH8 313 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 ULK4Q96C45 1275 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 FTHL17Q9BXU8 183 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 GMIPQ9P107 970 aa10.09□□□□□ -0.79
HMGCR-201ENST00000287936 COPG1Q9Y678 874 aaKnown RBP10.09□□□□□ -0.79
HMGCR-201ENST00000287936 ZNF623O75123 536 aa10.08□□□□□ -0.8
HMGCR-201ENST00000287936 MAGEA12P43365 314 aa10.08□□□□□ -0.8
HMGCR-201ENST00000287936 CHRNA4P43681 627 aa10.08□□□□□ -0.8
HMGCR-201ENST00000287936 SCNN1BP51168 640 aa10.08□□□□□ -0.8
HMGCR-201ENST00000287936 NME5P56597 212 aa10.08□□□□□ -0.8
HMGCR-201ENST00000287936 SEMA3BQ13214 749 aa10.08□□□□□ -0.8
HMGCR-201ENST00000287936 IMPG1Q17R60 797 aa10.08□□□□□ -0.8
HMGCR-201ENST00000287936 REP15Q6BDI9 236 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms