RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 RRN3Q9NYV6 651 aa13.33□□□□□ -0.28
SLC28A1-201ENST00000286749 RSL24D1Q9UHA3 163 aaKnown RBP13.33□□□□□ -0.28
SLC28A1-201ENST00000286749 NEU3Q9UQ49 428 aa13.33□□□□□ -0.28
SLC28A1-201ENST00000286749 ATP6AP2A0A1C7CYW4 349 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 UNCXA6NJT0 531 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 H3BNH8 94 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 ATP6AP2O75787 350 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 HLA-DQB2P05538 268 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 CCDC166P0CW27 439 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 CKMT2P17540 419 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 PAMP19021 973 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 TSPAN8P19075 237 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 ADRA1AP35348 466 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 GEMP55040 296 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 CLEC6AQ6EIG7 209 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 GAB3Q8WWW8 586 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 PBXIP1Q96AQ6 731 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 PPP1R10Q96QC0 940 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 IL12RB2Q99665 862 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 LIN28AQ9H9Z2 209 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 OLAHQ9NV23 265 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 CROTQ9UKG9 612 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 MYRFQ9Y2G1 1151 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 MEIS3P2A8K0S8 358 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 HTRA2O43464 458 aaPredicted RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 NRP2O60462 931 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 SLC7A2P52569 658 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 PCSK7Q16549 785 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 SAMD4BQ5PRF9 694 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 AGAP9Q5VTM2 703 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 TWF2Q6IBS0 349 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 KIAA0930Q6ICG6 404 aaPredicted RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 RMND5BQ96G75 393 aaPredicted RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 TSPAN18Q96SJ8 248 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 SLC25A23Q9BV35 468 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 FBRSL1Q9HCM7 1045 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 PNPLA3Q9NST1 481 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 TMEM181Q9P2C4 612 aa13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 IPO11Q9UI26 975 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 DICER1Q9UPY3 1922 aaKnown RBP13.32□□□□□ -0.28
SLC28A1-201ENST00000286749 MBLAC1A4D2B0 266 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 UBFD1O14562 309 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 MAFKO60675 156 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 LTA4HP09960 611 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 GJA5P36382 358 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 ALDH3B2P48448 385 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 NDST2P52849 883 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 ZNF33AQ06730 810 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 MYBPC3Q14896 1274 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 DHFR2Q86XF0 187 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 DQX1Q8TE96 717 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 PTCD2Q8WV60 388 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 CCDC126Q96EE4 140 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 MRGPRX2Q96LB1 330 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 UHRF1Q96T88 793 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 EFHD1Q9BUP0 239 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 SLC39A8Q9C0K1 460 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 TSPYL2Q9H2G4 693 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 MRM3Q9HC36 420 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 RBM22Q9NW64 420 aaKnown RBP eCLIP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 TRAF6Q9Y4K3 522 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 HEMK1Q9Y5R4 338 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 SOCS2O14508 198 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 MATN3O15232 486 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 ATP6V1B2P21281 511 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 RPL10P27635 214 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 CDH15P55291 814 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 FAM45BPQ6NSW5 357 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 CYHR1Q6ZMK1 362 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 ZBTB49Q6ZSB9 765 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 LPCAT2Q7L5N7 544 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 DPP9Q86TI2 863 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 FAM45AQ8TCE6 357 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 ANKRD49Q8WVL7 239 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 CDCA5Q96FF9 252 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 DUS3LQ96G46 650 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 RANBP9Q96S59 729 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 GSTO2Q9H4Y5 243 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 SPON1Q9HCB6 807 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 ENTPD7Q9NQZ7 604 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 ADARB2Q9NS39 739 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 MRGBPQ9NV56 204 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 NDFIP2Q9NV92 336 aa13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 DUS2Q9NX74 493 aaKnown RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.31□□□□□ -0.28
SLC28A1-201ENST00000286749 A0A0J9YVX5 310 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 DYNC1LI2O43237 492 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 TREHO43280 583 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 AKAP10O43572 662 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 GRIA3P42263 894 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 LHX1P48742 406 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 CDK9P50750 372 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 PRAMEP78395 509 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 DCTN2Q13561 401 aaKnown RBP13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 CCDC117Q8IWD4 279 aaPredicted RBP13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 FIBCD1Q8N539 461 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 RIN3Q8TB24 985 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 CANT1Q8WVQ1 401 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 SMARCD1Q96GM5 515 aa13.3□□□□□ -0.28
SLC28A1-201ENST00000286749 IL1RL2Q9HB29 575 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms