RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 JUNDP17535 347 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 SERPINB6P35237 376 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 HSPA9P38646 679 aaKnown RBP16.19■□□□□ 0.18
USE1-201ENST00000263897 MMP12P39900 470 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 LIG3P49916 1009 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 AP1S1P61966 158 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 DAB2P98082 770 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 MMRN1Q13201 1228 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 LRRC14Q15048 493 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 WSCD2Q2TBF2 565 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 CPNE8Q86YQ8 564 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 LRRC49Q8IUZ0 686 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 RNF214Q8ND24 703 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 CHP1Q99653 195 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 DEF6Q9H4E7 631 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 CCDC86Q9H6F5 360 aaKnown RBP16.19■□□□□ 0.18
USE1-201ENST00000263897 LCMT1Q9UIC8 334 aa16.19■□□□□ 0.18
USE1-201ENST00000263897 URB1O60287 2271 aaKnown RBP16.19■□□□□ 0.18
USE1-201ENST00000263897 SHROOM3Q8TF72 1996 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.18■□□□□ 0.18
USE1-201ENST00000263897 TTC24A2A3L6 582 aaPredicted RBP16.18■□□□□ 0.18
USE1-201ENST00000263897 TMEM110-MUSTN1A8MSY1 372 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 K7ESM1 405 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 AKR1B10O60218 316 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 LZTS3O60299 673 aaPredicted RBP16.18■□□□□ 0.18
USE1-201ENST00000263897 NEBLO76041 1014 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 PRKCGP05129 697 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 TPM1P09493 284 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 CKMT1AP12532 417 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 CR2P20023 1033 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 PEX5P50542 639 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 ADKP55263 362 aaKnown RBP16.18■□□□□ 0.18
USE1-201ENST00000263897 CLDN6P56747 220 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 E2F1Q01094 437 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 SEMG2Q02383 582 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 ZNF235Q14590 738 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 PDK2Q15119 407 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 IRF4Q15306 451 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 PROSER1Q86XN7 944 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 BBS5Q8N3I7 341 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 PGBD5Q8N414 524 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 ATPAF2Q8N5M1 289 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 PAF1Q8N7H5 531 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 PDCD7Q8N8D1 485 aaKnown RBP16.18■□□□□ 0.18
USE1-201ENST00000263897 FAM181AQ8N9Y4 354 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 KCTD6Q8NC69 237 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 ZNF548Q8NEK5 533 aaPredicted RBP16.18■□□□□ 0.18
USE1-201ENST00000263897 BTN2A2Q8WVV5 523 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 SPOCK2Q92563 424 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 APOLD1Q96LR9 279 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 NUDCD1Q96RS6 583 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 DUSP23Q9BVJ7 150 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 ABHD10Q9NUJ1 306 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 ASXL3Q9C0F0 2248 aa16.18■□□□□ 0.18
USE1-201ENST00000263897 MYLKQ15746 1914 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 SPEGQ15772 3267 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 AQP9O43315 295 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 TMEM253P0C7T8 217 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 HNF1BP35680 557 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 TAS2R40P59535 323 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 RALGDSQ12967 914 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 DPYSL3Q14195 570 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 INPP5AQ14642 412 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 PAFAH1B3Q15102 231 aaKnown RBP16.17■□□□□ 0.18
USE1-201ENST00000263897 MARC1Q5VT66 337 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 LIPIQ6XZB0 460 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 MACC1Q6ZN28 852 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 MAP7D3Q8IWC1 876 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 CACTIN-AS1Q8N1I8 211 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 PCDH19Q8TAB3 1148 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 MDM1Q8TC05 714 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 NSMCE1Q8WV22 266 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 CCDC42Q96M95 316 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 NOD2Q9HC29 1040 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 SPASTQ9UBP0 616 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 DKK4Q9UBT3 224 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 PNMA8BQ9ULN7 279 aaPredicted RBP16.17■□□□□ 0.18
USE1-201ENST00000263897 PCDHGC4Q9Y5F7 938 aa16.17■□□□□ 0.18
USE1-201ENST00000263897 LY6G6EA0A0G2JKS1 128 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 A0A1W2PQ67 120 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 TPP1O14773 563 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 HTRA2O43464 458 aaPredicted RBP16.16■□□□□ 0.18
USE1-201ENST00000263897 MFAP3LO75121 409 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 KRT7P08729 469 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 GJC1P36383 396 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 MMP13P45452 471 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 DUSP3P51452 185 aaPredicted RBP16.16■□□□□ 0.18
USE1-201ENST00000263897 PPARDQ03181 441 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 CYP4F3Q08477 520 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 TARDBPQ13148 414 aaKnown RBP eCLIP16.16■□□□□ 0.18
USE1-201ENST00000263897 ANKRD20A8PQ5CZ79 823 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 RALGPS1Q5JS13 557 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 FAXCQ5TGI0 409 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 HES3Q5TGS1 186 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 DPPA4Q7L190 304 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 PHACTR4Q8IZ21 702 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 RBFAQ8N0V3 343 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 SLC35G2Q8TBE7 412 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 LMX1AQ8TE12 382 aa16.16■□□□□ 0.18
USE1-201ENST00000263897 RFFLQ8WZ73 363 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms