RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 LBX2Q6XYB7 198 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 RTL4Q6ZR62 310 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 PRICKLE2Q7Z3G6 844 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 PRRT2Q7Z6L0 340 aaPredicted RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 MRPL41Q8IXM3 137 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 RBFAQ8N0V3 343 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 ANKFN1Q8N957 763 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CAMKVQ8NCB2 501 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 SMPDL3BQ92485 455 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 EDEM1Q92611 657 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CLP1Q92989 425 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 POP5Q969H6 163 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 MYLPFQ96A32 169 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 ARMC5Q96C12 935 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 FER1L6-AS2Q96M78 137 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 IER2Q9BTL4 223 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 THUMPD3Q9BV44 507 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 HES7Q9BYE0 225 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 ZMYND12Q9H0C1 365 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 RNF39Q9H2S5 420 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 HIPK2Q9H2X6 1198 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CARS2Q9HA77 564 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 GKN1Q9NS71 199 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.06□□□□□ -1.76
RNF38-201ENST00000259605 LIMD1Q9UGP4 676 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 MCM8Q9UJA3 840 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 AGO1Q9UL18 857 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 GRID1Q9ULK0 1009 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CDYLQ9Y232 598 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 SLC27A5Q9Y2P5 690 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 MYO3AQ8NEV4 1616 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 A0A1B0GVM2 712 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 TCAF2A6NFQ2 919 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CAPN5O15484 640 aaPredicted RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 NMT2O60551 498 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 WDR47O94967 919 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 KLF8O95600 359 aaPredicted RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 BMP7P18075 431 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 GRIA2P42262 883 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 NR2C2P49116 596 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 ST13P50502 369 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 NOVA1P51513 510 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 MYL6P60660 151 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 IRF5Q13568 498 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 ZNF268Q14587 947 aaPredicted RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 ACAP1Q15027 740 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CYTH1Q15438 398 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 NR0B2Q15466 257 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 LPAL2Q16609 132 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 Q4G0T1 1027 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 BEND6Q5SZJ8 279 aaPredicted RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 WSCD1Q658N2 575 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 SMIM5Q71RC9 77 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 PIM3Q86V86 326 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 VSIG10LQ86VR7 867 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 ZNF527Q8NB42 609 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 OR5L2Q8NGL0 311 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 WDR36Q8NI36 951 aaKnown RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 SH3RF2Q8TEC5 729 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 WNT8BQ93098 351 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 RAB7BQ96AH8 199 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 MYO19Q96H55 970 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 VCPIP1Q96JH7 1222 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 TMEM209Q96SK2 561 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CHID1Q9BWS9 393 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 TMEM121BQ9BXQ6 578 aaPredicted RBP4.06□□□□□ -1.76
RNF38-201ENST00000259605 DEFB126Q9BYW3 111 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CNGB3Q9NQW8 809 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 SOX13Q9UN79 622 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CYP8B1Q9UNU6 501 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 SLC9A8Q9Y2E8 581 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 SH3GLB1Q9Y371 365 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 PCDHB14Q9Y5E9 798 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 CPQQ9Y646 472 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 ARHGEF40Q8TER5 1519 aa4.06□□□□□ -1.76
RNF38-201ENST00000259605 A0A087X0B3 334 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 A0A0A6YYK5 440 aaPredicted RBP4.05□□□□□ -1.76
RNF38-201ENST00000259605 SDR42E2A6NKP2 422 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 RGS14O43566 566 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 RPP40O75818 363 aaKnown RBP4.05□□□□□ -1.76
RNF38-201ENST00000259605 SUPT7LO94864 414 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 KCNH1O95259 989 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 CAPN1P07384 714 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 GLI1P08151 1106 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 MSL3P1P0C860 447 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 MAT2AP31153 395 aaKnown RBP4.05□□□□□ -1.76
RNF38-201ENST00000259605 DNASE1L1P49184 302 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 FXR2P51116 673 aaKnown RBP eCLIP4.05□□□□□ -1.76
RNF38-201ENST00000259605 CLCN7P51798 805 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 EPHB4P54760 987 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 PPP2R2BQ00005 443 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 HSPA14Q0VDF9 509 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 ZNF155Q12901 538 aaPredicted RBP4.05□□□□□ -1.76
RNF38-201ENST00000259605 DYNC1I2Q13409 638 aaKnown RBP4.05□□□□□ -1.76
RNF38-201ENST00000259605 RUNX2Q13950 521 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 NR1D2Q14995 579 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 MED1Q15648 1581 aaPredicted RBP4.05□□□□□ -1.76
RNF38-201ENST00000259605 MAPK14Q16539 360 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 HGSNATQ68CP4 663 aa4.05□□□□□ -1.76
RNF38-201ENST00000259605 PMF1Q6P1K2 205 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms