RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SALL4Q9UJQ4 1053 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 OR1A2Q9Y585 309 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 TTC24A2A3L6 582 aaPredicted RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 YY2O15391 372 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 LZTS3O60299 673 aaPredicted RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 TSHRP16473 764 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 IL1R2P27930 398 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 INPP5AQ14642 412 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 SMTNL2Q2TAL5 461 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 PERM1Q5SV97 790 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 BRAT1Q6PJG6 821 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 LRRC69Q6ZNQ3 347 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 RD3Q7Z3Z2 195 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 HID1Q8IV36 788 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 SLC35F3Q8IY50 421 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 PAF1Q8N7H5 531 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 FGF11Q92914 225 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 NSMCE3Q96MG7 304 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 BBC3Q96PG8 261 aaPredicted RBP19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 FUCA2Q9BTY2 467 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 ATP13A3Q9H7F0 1226 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 ATP8A1Q9Y2Q0 1164 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 SCINQ9Y6U3 715 aa19.16■□□□□ 0.66
TM6SF1-201ENST00000258909 A8MX80 341 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 TPP1O14773 563 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 PCCBP05166 539 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 ANXA6P08133 673 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 SERPINA4P29622 427 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 MMP12P39900 470 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 CCDC173Q0VFZ6 552 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 NR0B2Q15466 257 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 ENPP7Q6UWV6 458 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 TUBGCP5Q96RT8 1024 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 BOCQ9BWV1 1114 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 ZWILCHQ9H900 591 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 RAI2Q9Y5P3 530 aa19.15■□□□□ 0.66
TM6SF1-201ENST00000258909 COL27A1Q8IZC6 1860 aaPredicted RBP19.14■□□□□ 0.66
TM6SF1-201ENST00000258909 SHROOM3Q8TF72 1996 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 EME2A4GXA9 379 aaPredicted RBP19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 LMO7DNF2Z398 122 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 RRP8O43159 456 aaKnown RBP19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 AMPD1P23109 780 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 ACTN2P35609 894 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 CSNK1DP48730 415 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 SCNN1BP51168 640 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 GABREP78334 506 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 BCL2L1Q07817 233 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 IL10RBQ08334 325 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 SLC10A7Q0GE19 358 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 DPYSQ14117 519 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 KIF26BQ2KJY2 2108 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 ALG11Q2TAA5 492 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 TBC1D25Q3MII6 688 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 TDRD12Q587J7 1177 aaKnown RBP19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 C6orf132Q5T0Z8 1188 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 KCTD16Q68DU8 428 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 PLA2G15Q8NCC3 412 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 SNIP1Q8TAD8 396 aaKnown RBP19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 HSPH1Q92598 858 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 APOOQ9BUR5 198 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 EDEM3Q9BZQ6 932 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 ISCUQ9H1K1 167 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 MRPL47Q9HD33 250 aaKnown RBP19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 ETNK2Q9NVF9 386 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 NCKIPSDQ9NZQ3 722 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 GULP1Q9UBP9 304 aa19.14■□□□□ 0.65
TM6SF1-201ENST00000258909 LRP4O75096 1905 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 SYCE3A1L190 88 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 TOR1BO14657 336 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 MYBL1P10243 752 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 HCAR3P49019 387 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 HK3P52790 923 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 RALGDSQ12967 914 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 ISXQ2M1V0 245 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 HGSNATQ68CP4 663 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 TXNRD3NBQ6F5E7 133 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 LUZP1Q86V48 1076 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 PSTKQ8IV42 348 aaKnown RBP19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 CPLX3Q8WVH0 158 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 TRIM11Q96F44 468 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 NAF1Q96HR8 494 aaKnown RBP19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 BTBD6Q96KE9 485 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 CBX8Q9HC52 389 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 SIRPGQ9P1W8 387 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 DOLKQ9UPQ8 538 aa19.13■□□□□ 0.65
TM6SF1-201ENST00000258909 H3BRJ5 948 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 CTSEP14091 401 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 HTR1BP28222 390 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 PCK1P35558 622 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 PEX5P50542 639 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 FANCCQ00597 558 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 LBRQ14739 615 aaKnown RBP19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 NFATC4Q14934 902 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 PCDH19Q8TAB3 1148 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 GLMNQ92990 594 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 ECHDC3Q96DC8 303 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 MGAQ8IWI9 3026 aa19.12■□□□□ 0.65
TM6SF1-201ENST00000258909 TMEM110-MUSTN1A8MSY1 372 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms