RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 PHTF1Q9UMS5 762 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 RPL26L1Q9UNX3 145 aaKnown RBP23.78■■□□□ 1.4
HOMER3-201ENST00000221222 ANXA9O76027 345 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 CPP00450 1065 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PDHA1P08559 390 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PSMB4P28070 264 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 MPP3Q13368 585 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PARP6Q2NL67 630 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 NEK5Q6P3R8 708 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 KDELC1Q6UW63 502 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PRR23BQ6ZRT6 265 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 CCDC89Q8N998 374 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 TRIB3Q96RU7 358 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 CHKBQ9Y259 395 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 PPIL1Q9Y3C6 166 aa23.78■■□□□ 1.4
HOMER3-201ENST00000221222 CACNA1AO00555 2505 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 TNRC6BQ9UPQ9 1833 aaKnown RBP23.77■■□□□ 1.4
HOMER3-201ENST00000221222 IFNB1P01574 187 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 XPAP23025 273 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-201ENST00000221222 GEMP55040 296 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 FOXK2Q01167 660 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 ELP6Q0PNE2 266 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 CCDC137Q6PK04 289 aaKnown RBP23.77■■□□□ 1.4
HOMER3-201ENST00000221222 LPCAT2Q7L5N7 544 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 ERMP1Q7Z2K6 904 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 PAF1Q8N7H5 531 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 GLIS1Q8NBF1 620 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 C6orf106Q9H6K1 298 aaPredicted RBP23.77■■□□□ 1.4
HOMER3-201ENST00000221222 PCDH12Q9NPG4 1184 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 UBP1Q9NZI7 540 aa23.77■■□□□ 1.4
HOMER3-201ENST00000221222 AAR2Q9Y312 384 aaKnown RBP23.77■■□□□ 1.4
HOMER3-201ENST00000221222 RIOK3O14730 519 aaKnown RBP23.76■■□□□ 1.39
HOMER3-201ENST00000221222 TSPAN6O43657 245 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 METTL18O95568 372 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 ACTN2P35609 894 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 CDK18Q07002 472 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 PRPSAP1Q14558 356 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 ELF2Q15723 593 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 LRRC73Q5JTD7 316 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 ERAP2Q6P179 960 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 GSTA5Q7RTV2 222 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 ZNF592Q92610 1267 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 FOXJ1Q92949 421 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 FEM1CQ96JP0 617 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 MCCC1Q96RQ3 725 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-201ENST00000221222 MLPHQ9BV36 600 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-201ENST00000221222 ADGRE3Q9BY15 652 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 PAK5Q9P286 719 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 FEZ2Q9UHY8 353 aaPredicted RBP23.76■■□□□ 1.39
HOMER3-201ENST00000221222 RAB23Q9ULC3 237 aa23.76■■□□□ 1.39
HOMER3-201ENST00000221222 TPX2Q9ULW0 747 aaKnown RBP23.76■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3DA0A087WVF3 549 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3IA0A087WXS9 549 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3EA0A087X179 549 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3KA0A087X1G2 549 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 LOC285095A0A1B0GVY8 99 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3FA6NER0 549 aaPredicted RBP23.75■■□□□ 1.39
HOMER3-201ENST00000221222 METTL12A8MUP2 240 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3LB9A6J9 549 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 F5H423 210 aaPredicted RBP23.75■■□□□ 1.39
HOMER3-201ENST00000221222 CCDC188H7C350 402 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 PMPCBO75439 489 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 RHOBTB1O94844 696 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 EPOP01588 193 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3HP0C7X1 549 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 ETS1P14921 441 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 NFKBIAP25963 317 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 MMP12P39900 470 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 WNT3AP56704 352 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 PCSK7Q16549 785 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 RSPO4Q2I0M5 234 aaPredicted RBP23.75■■□□□ 1.39
HOMER3-201ENST00000221222 KIAA0895LQ68EN5 471 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3GQ6DHY5 549 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3CQ6IPX1 549 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 C4orf22Q6V702 233 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 DGLUCYQ7Z3D6 616 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TRIM69Q86WT6 500 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TMEFF1Q8IYR6 380 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TBC1D3Q8IZP1 549 aaPredicted RBP23.75■■□□□ 1.39
HOMER3-201ENST00000221222 SCRN2Q96FV2 425 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 MRGPRX2Q96LB1 330 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 CDC23Q9UJX2 597 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 GMEB2Q9UKD1 530 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 ITM2BQ9Y287 266 aa23.75■■□□□ 1.39
HOMER3-201ENST00000221222 TRPM6Q9BX84 2022 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 FAM47DPA6NHR8 397 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 ITIH2P19823 946 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 RPL22P35268 128 aaKnown RBP23.74■■□□□ 1.39
HOMER3-201ENST00000221222 GRIA4P48058 902 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 CCR5P51681 352 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 TMEM52BQ4KMG9 183 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 PRUNE1Q86TP1 453 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 SLC41A1Q8IVJ1 513 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 NDUFAF2Q8N183 169 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 LPCAT1Q8NF37 534 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 KIF18AQ8NI77 898 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 GRK7Q8WTQ7 553 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 IFT43Q96FT9 208 aa23.74■■□□□ 1.39
HOMER3-201ENST00000221222 DDX47Q9H0S4 455 aaKnown RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms