RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SMIM28A0A1B0GU29 152 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 C9JVG2 144 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 TRIM24O15164 1050 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 MTSS1O43312 755 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 NRP2O60462 931 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 GNAO1P09471 354 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 HSPA1AP0DMV8 641 aaKnown RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 HSPA1BP0DMV9 641 aaKnown RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 CD97P48960 835 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 ESRRGP62508 458 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 SOX4Q06945 474 aaPredicted RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 ARL13BQ3SXY8 428 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 KCTD21Q4G0X4 260 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 RBM20Q5T481 1227 aaKnown RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 TTC33Q6PID6 262 aaPredicted RBP10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 TBL1YQ9BQ87 522 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 SYT17Q9BSW7 474 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 TKTL2Q9H0I9 626 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 RBPJLQ9UBG7 517 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 CACNG4Q9UBN1 327 aa10.59□□□□□ -0.71
CX3CL1-201ENST00000006053 PIRO00625 290 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 LRIG2O94898 1065 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 CCNA1P78396 465 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 SAMD4BQ5PRF9 694 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 MAMDC4Q6UXC1 1216 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 LINC00523Q86TU6 105 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 PPHLN1Q8NEY8 458 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 EXT2Q93063 718 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 MAML3Q96JK9 1138 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 HNRNPABQ99729 332 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 WDCPQ9H6R7 721 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 EGFL7Q9UHF1 273 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 TMED5Q9Y3A6 229 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 SPO11Q9Y5K1 396 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 DNAH12Q6ZR08 3092 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 RNF103-CHMP3A0A140T963 221 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 CLIC3O95833 236 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 CD4P01730 458 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 IGFBP6P24592 240 aaPredicted RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 ADCYAP1R1P41586 468 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 HALP42357 657 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 CSRP3P50461 194 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 CREB5Q02930 508 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 GALNT2Q10471 571 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 FAM83EQ2M2I3 478 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 KIF19Q2TAC6 998 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 WSCD1Q658N2 575 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 NOTUMQ6P988 496 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 SLC2A7Q6PXP3 512 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 PAQR9Q6ZVX9 377 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 CBR4Q8N4T8 237 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 DCPSQ96C86 337 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 SLC2A13Q96QE2 648 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 DUS2Q9NX74 493 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 FBXW11Q9UKB1 542 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 PIN4Q9Y237 131 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 TCRBV3S1A0A5B6 114 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 A8MT66 165 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 GSTT2P0CG29 244 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 GSTT2BP0CG30 244 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 HSPA8P11142 646 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 ATP6V1B2P21281 511 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 CHRNA4P43681 627 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 TBCELQ5QJ74 424 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 C6orf10Q5SRN2 563 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 ZNF362Q5T0B9 420 aaPredicted RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 GPRIN1Q7Z2K8 1008 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 CPNE9Q8IYJ1 553 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 ALDH16A1Q8IZ83 802 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 IRGQQ8WZA9 623 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 LRCH3Q96II8 777 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 SLC25A23Q9BV35 468 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 FBXO5Q9UKT4 447 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 SLC8A2Q9UPR5 921 aa10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 TMA7Q9Y2S6 64 aaKnown RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 TIMM13Q9Y5L4 95 aaPredicted RBP10.58□□□□□ -0.72
CX3CL1-201ENST00000006053 DNAJC25-GNG10A0A024R161 153 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 H0YJX3 145 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 TMX2-CTNND1H3BSU7 103 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 NR5A2O00482 541 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 SUPT7LO94864 414 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 CPB1P15086 417 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 ARNTP27540 789 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 KPNA2P52292 529 aaKnown RBP10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 STX1BP61266 288 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 TRAP1Q12931 704 aaKnown RBP10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 SEMA3BQ13214 749 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 PCSK7Q16549 785 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 GEN1Q17RS7 908 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 ZNF789Q5FWF6 425 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 SPPL2CQ8IUH8 684 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 CYGBQ8WWM9 190 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 TCF12Q99081 682 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 VAT1Q99536 393 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 C16orf70Q9BSU1 422 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 COLEC11Q9BWP8 271 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 EML4Q9HC35 981 aaKnown RBP10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 CDC14AQ9UNH5 594 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 SQORQ9Y6N5 450 aa10.57□□□□□ -0.72
CX3CL1-201ENST00000006053 GIPC1O14908 333 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms