RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Serbp1Q9CY58 407 aaKnown RBP13.52□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Hddc3Q9D114 179 aa13.52□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Q9D1Z2 194 aa13.52□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Capn10Q9ESK3 666 aa13.52□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Prmt1Q9JIF0 371 aa13.52□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Cyp3a41aQ9JMA7 504 aa13.52□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Tmem115Q9WUH1 350 aa13.52□□□□□ -0.24
Rnf4-204ENSMUST00000182047 GghQ9Z0L8 317 aa13.52□□□□□ -0.24
Rnf4-204ENSMUST00000182047 Gm5930D3Z257 264 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 PiggD3Z3Y1 983 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gm8257E9Q8R3 264 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 2610028H24RikG5E8K1 270 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 EsrraO08580 422 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 TertO70372 1122 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Pknox1O70477 436 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 P01670 111 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 P01671 111 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 P01672 111 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 P04214 136 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Znf800Q0VEE6 662 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Pde1aQ61481 565 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Scube1Q6NZL8 1018 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Catsper3Q80W99 395 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 SybuQ8BHS8 665 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Clp1Q99LI9 425 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Anks3Q9CZK6 655 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Alg14Q9D081 217 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 IcmtQ9EQK7 283 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Maged2Q9ER67 616 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Tubb3Q9ERD7 450 aa13.52□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Rpl9-ps6A0A140T8T4 192 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Fibcd1A2AV25 459 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Sh2d4bA6X942 431 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Skint6A7XUZ6 1240 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Olfr600E9PUN7 314 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Rad51ap2G3UW63 976 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Scg3P47867 471 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Rpl9P51410 192 aaKnown RBP13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Rps24P62849 133 aaKnown RBP13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Pitx1P70314 315 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Caprin2Q05A80 1031 aaKnown RBP13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Myadml2Q08AU7 307 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 PigaQ64323 485 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Slc9a7Q8BLV3 726 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cgrrf1Q8BMJ7 332 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Neu4Q8BZL1 478 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 CopaQ8CIE6 1224 aaKnown RBP13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Nudt13Q8JZU0 352 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Tmem161aQ8VCA6 480 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Olfr847Q8VFF4 312 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Setd7Q8VHL1 366 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Adam33Q923W9 797 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Mrpl9Q99N94 265 aaKnown RBP13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 CygbQ9CX80 190 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ola1Q9CZ30 396 aaKnown RBP13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ccdc130Q9D516 385 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 RalbQ9JIW9 206 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Igkv18-36A0A075B5M9 114 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Armt1A6H630 439 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Osbpl8B9EJ86 889 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Fgf10O35565 209 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Myl4P09541 193 aaKnown RBP13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 CidecP56198 239 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Irf7P70434 457 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 NxnP97346 435 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Itga4Q00651 1039 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cox8aQ64445 69 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Atp2a3Q64518 1038 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Fam109aQ8BH49 266 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Klhl38Q8BSF5 581 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Plin5Q8BVZ1 463 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Galnt5Q8C102 930 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Slco4a1Q8K078 723 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Oas1dQ8VI95 361 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 LiasQ99M04 373 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Actrt2Q9D9L5 377 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Ing2Q9ESK4 281 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Prl5a1Q9JII2 230 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cacng3Q9JJV5 315 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Dnajb2Q9QYI5 324 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Sept6Q9R1T4 434 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Rbck1Q9WUB0 508 aa13.51□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Olfr414E9Q5P8 317 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cdh18E9Q9Q6 790 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Gm7073E9QAS1 335 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Vmn2r70K7N702 854 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 AmacrO09174 381 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Prkag1O54950 330 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Psma3O70435 255 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Rps6ka3P18654 740 aaKnown RBP13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Crabp2P22935 138 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Crhr1P35347 415 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Il12bP43432 335 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Mxd1P50538 227 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Aqp4P55088 323 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 AurkaP97477 395 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Cdk7Q03147 346 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Tmem255bQ5FW56 369 aa13.5□□□□□ -0.25
Rnf4-204ENSMUST00000182047 Kcna4Q61423 654 aa13.5□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 35.1 ms